RNA id: TU35756


Basic Information

Item Value
RNA id TU35756
length 251
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G23964
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28328465 ~ 28329411 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCCAAGGGCTTTCGGTTGGCCTTTCAGAAATGCTCGAAGTCCATTAAGAGGAGAAACTCCTGTTACCTGTTGGACATAAATAGGCACAGGAGCATTGGTCACAGTCCCGGCTGGTGCTGTTTGTGTCGGTGGTTGAATCTGGATGATGAGTGTTGAAGAGTTCACGGGTAAGACTGTTTGGGACATTCTCGTTTCAGAATCTGAaaaaaaaaactgtgttcaGTTTGCTCTGTAGATTTtctcagaatcac

Function

GO:

id name namespace
GO:0008146 sulfotransferase activity molecular_function
GO:0047372 acylglycerol lipase activity molecular_function
GO:0016782 transferase activity, transferring sulfur-containing groups molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248988.1 lncRNA upstream 8309 28319710 ~ 28320156 (+) True LOC122335640
TU35738 lncRNA upstream 92929 28227075 ~ 28235536 (+) True G23953
XR_006248990.1 lncRNA upstream 292307 28034400 ~ 28036158 (+) True LOC122335654
TU35716 lncRNA upstream 383249 27942182 ~ 27945216 (+) True G23931
TU35707 lncRNA upstream 522132 27804611 ~ 27806333 (+) True G23924
XR_006248991.1 lncRNA downstream 64330 28393741 ~ 28394538 (+) True LOC122335662
TU36004 lncRNA downstream 374619 28704030 ~ 28705144 (+) True G24132
TU36022 lncRNA downstream 379369 28708780 ~ 28715865 (+) True G24138
TU36023 lncRNA downstream 380495 28709906 ~ 28716193 (+) True G24139
XR_006248999.1 lncRNA downstream 388621 28718032 ~ 28719109 (+) True LOC122335688
XM_043234723.1 mRNA upstream 8756 28316600 ~ 28319709 (+) True LOC122341391
XM_043232688.1 mRNA upstream 260366 28036420 ~ 28068099 (+) True LOC122334736
XM_043233349.1 mRNA upstream 376008 27951751 ~ 27952457 (+) True LOC122335462
XM_043233192.1 mRNA upstream 598573 27728324 ~ 27729892 (+) False LOC122335347
XM_043232766.1 mRNA downstream 263393 28592804 ~ 28650650 (+) False LOC122334878
XM_043232783.1 mRNA downstream 263398 28592809 ~ 28650650 (+) True LOC122334878
XM_043232794.1 mRNA downstream 263398 28592809 ~ 28650650 (+) False LOC122334878
XM_043232788.1 mRNA downstream 263398 28592809 ~ 28650650 (+) False LOC122334878
XM_043232797.1 mRNA downstream 263398 28592809 ~ 28650650 (+) False LOC122334878
TU35581 other upstream 1046059 27281849 ~ 27282406 (+) False LOC122335546
TU35317 other upstream 1481108 26846723 ~ 26847357 (+) True G23695
TU35299 other upstream 1527070 26798811 ~ 26801395 (+) False srsf2b
TU35969 other downstream 186232 28515643 ~ 28560324 (+) True G24115
XR_006248835.1 other downstream 263404 28592815 ~ 28647092 (+) False LOC122334878
TU36019 other downstream 377902 28707313 ~ 28708599 (+) False LOC122341395
TU36055 other downstream 514430 28843841 ~ 28846292 (+) False LOC122335482
TU36269 other downstream 899342 29228753 ~ 29230230 (+) False cenpx

Expression Profile