RNA id: TU35969



Basic Information


Item Value
RNA id TU35969
length 843
RNA type TUCP
GC content 0.49
exon number 5
gene id G24115
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28515643 ~ 28560324 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttttgctaaaataaaatcgCAATAATCAGAGCCACCTCGCTTTAGTTAATCCAACTGTGgtttaaatgaatttcatttaatgctgtagtttattttattcagtttgtctATAAAGGGTGGGCGATATCGCCCAGCACTAATGTCTACTTTCGTTCAGTTTTGGTGCATGTATTGGTTTGATAATTGATttgaatatgaaacatttttttttatgcttttccaCAGTGTGCTGTTTTGTGGTCCACAAAAGGTGCCATGAGTTCGTTTCCTTCTCCTGTCCAGGGGCCGACAAGGGGCCTGACACAGATGATCCCAGGAGCAAGCACAAGTTTAAGATCCACAGCTACGGCAGTCCCACCTTCTGCGACCACTGTGGATCGCTGCTGTACGGCCTCATCCACCAGGGGATGAAATGTGACACCTGCGACATGAACGTTCATAAGCAGTGCGTGATGAACGTGCCAAGTCTGTGCGGCACCGACCACACTGAGCGCAGAGGAAGACTCTTTCTCAAGATCGAGGTCAGCGGAGACAGACTTCACGTCACAGTGGGCGAGGCCCGAAACCTGATTCCCATGGACCCCAATGGCCTGTCAGACCCGTATGTGAAGCTCAAACTCATCCCGGACCCCAAGAACGAGACCAAACAGAAGACCCGCACTATCCGCTCCTCGCTCAACCCCACCTGGAACGAGTCCTTCATCTTcaAGTTAAAGCCTTCGGATAAGGAGCGTCGCCTGTCTGTGGAGGTGTGGGATTGGGACAGAACCACCCGTAATGACTTCATGGGCTCTATGTCCTTTGGTGTGTCGGAGCTGATCAAAGCTCCTATAAGTGGCTGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006248991.1 lncRNA upstream 121105 28393741 ~ 28394538 (+) True LOC122335662
TU35756 lncRNA upstream 186232 28328465 ~ 28329411 (+) True G23964
XR_006248988.1 lncRNA upstream 195487 28319710 ~ 28320156 (+) True LOC122335640
TU35738 lncRNA upstream 280107 28227075 ~ 28235536 (+) True G23953
XR_006248990.1 lncRNA upstream 479485 28034400 ~ 28036158 (+) True LOC122335654
TU36004 lncRNA downstream 143706 28704030 ~ 28705144 (+) True G24132
TU36022 lncRNA downstream 148456 28708780 ~ 28715865 (+) True G24138
TU36023 lncRNA downstream 149582 28709906 ~ 28716193 (+) True G24139
XR_006248999.1 lncRNA downstream 157708 28718032 ~ 28719109 (+) True LOC122335688
TU36034 lncRNA downstream 197371 28757695 ~ 28831744 (+) True G24146
XM_043234723.1 mRNA upstream 195934 28316600 ~ 28319709 (+) True LOC122341391
XM_043232590.1 mRNA upstream 443066 27574258 ~ 28072577 (+) False LOC122334574
XM_043232688.1 mRNA upstream 447544 28036420 ~ 28068099 (+) True LOC122334736
XM_043233349.1 mRNA upstream 563186 27951751 ~ 27952457 (+) True LOC122335462
XM_043233179.1 mRNA upstream 785751 27728274 ~ 27729892 (+) True LOC122335347
XM_043232766.1 mRNA downstream 32480 28592804 ~ 28650650 (+) False LOC122334878
XM_043232783.1 mRNA downstream 32485 28592809 ~ 28650650 (+) True LOC122334878
XM_043232794.1 mRNA downstream 32485 28592809 ~ 28650650 (+) False LOC122334878
XM_043232788.1 mRNA downstream 32485 28592809 ~ 28650650 (+) False LOC122334878
XM_043232797.1 mRNA downstream 32485 28592809 ~ 28650650 (+) False LOC122334878
TU35581 other upstream 1233237 27281849 ~ 27282406 (+) False LOC122335546
TU35317 other upstream 1668286 26846723 ~ 26847357 (+) True G23695
TU35298 other upstream 1714248 26798811 ~ 26801395 (+) False srsf2b
XR_006248835.1 other downstream 32491 28592815 ~ 28647092 (+) False LOC122334878
TU36019 other downstream 146989 28707313 ~ 28708599 (+) False LOC122341395
TU36055 other downstream 283517 28843841 ~ 28846292 (+) False LOC122335482
TU36269 other downstream 668429 29228753 ~ 29230230 (+) False cenpx
TU36401 other downstream 831594 29391918 ~ 29401266 (+) False LOC122335632

Expression Profile