RNA id: TU36034



Basic Information


Item Value
RNA id TU36034
length 979
lncRNA type read_through
GC content 0.39
exon number 2
gene id G24146
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28757695 ~ 28831744 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


agtttttttttttttttttttttttttTGTTTCTCTACATCTTCTAAATATATTTGGACAATTTTTgcacaaatgcacaaacattaaaatacatatacaaatccGTTCCGCAAGCTGTCTTATAAATACTGCCACAAACGAAGAAAAACAATCCGTTTACAGCCATCGGCACTTAAAACAATACGATGAACATATGCAGAAATTCAGTAATTGACAACATTAGATAGCTTCGTATTTTTCATGTACGTAGACAGCATTTCTACTTTAAACGGCAAGCAGTATTTACAGTATCTCATTAGCAAAACTGATATGCAGACGAAAATAGAGATATTGGTAGGCTATATACCATCAAACAACTGCGATATAATACTTTAAAACGATATATATGAATACTCGTGGAAGTAATCTAAACCAGCTGCtgattttctgttcatttttcatcCGGTTAATTCTTCCTACCCGACCAGTGAAGTTTGAGAATATGCACGTAAACACACGTCCTTacagataacaaaaaaaaagaggatttAGCTAGATCGCCCCCTTGTGGTGATAATACAATCTAGAGGTCTTCGTCCACGCTTCTAATCTAACGACTTCCTCTAAGGTTTTTCGACGCTATAAATAACATTCCTTCTTATGACAAGCACCTTGTTCCTATAAAAACCACAGTGAGAGAGTTTCACATGTCCGGGCTGCCTAAGCTGCTGAGCACAGTACGCTTTTACTATCAGAGTGCATGGTTTATATTTAGACGCTTTATCATCTGTACACCAGCCAGAGCAAACGGGGCAAACCGATAGGCCGACCGGCAGCTATGGGCACTTCTTGTGGAGTCTCACAGTCTATGAACGGGATAAAGCGAAATGACAAGGCAAGATGAAGTCTCGGGGACCGACGGGTTACGGCTCATTCTTACATCCTCTGGATCTCGAAGAGACGCACGTCTGTGTCGTACCAGATGGGTGGATCCACATTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006248999.1 lncRNA upstream 38586 28718032 ~ 28719109 (+) True LOC122335688
TU36023 lncRNA upstream 41502 28709906 ~ 28716193 (+) True G24139
TU36022 lncRNA upstream 41830 28708780 ~ 28715865 (+) True G24138
TU36004 lncRNA upstream 52551 28704030 ~ 28705144 (+) True G24132
XR_006248991.1 lncRNA upstream 363157 28393741 ~ 28394538 (+) True LOC122335662
TU36060 lncRNA downstream 23219 28854963 ~ 28855171 (+) True G24169
TU36061 lncRNA downstream 27141 28858885 ~ 28859136 (+) True G24170
TU36063 lncRNA downstream 30529 28862273 ~ 28862502 (+) True G24172
TU36065 lncRNA downstream 32900 28864644 ~ 28864859 (+) True G24174
TU36066 lncRNA downstream 35872 28867616 ~ 28868036 (+) True G24175
XM_043232830.1 mRNA upstream 20076 28735999 ~ 28737619 (+) True LOC122335069
XM_043234729.1 mRNA upstream 35751 28720547 ~ 28721944 (+) True LOC122341397
XM_043234728.1 mRNA upstream 43182 28711703 ~ 28714513 (+) True LOC122341396
XM_043234727.1 mRNA upstream 49087 28707031 ~ 28708608 (+) True LOC122341395
XM_043233130.1 mRNA upstream 99206 28653093 ~ 28658489 (+) False cacng5b
XM_043233373.1 mRNA downstream 12070 28843814 ~ 28846375 (+) False LOC122335482
XM_043233380.1 mRNA downstream 12076 28843820 ~ 28846375 (+) False LOC122335482
XM_043233367.1 mRNA downstream 12081 28843825 ~ 28846375 (+) True LOC122335482
XM_043232488.1 mRNA downstream 37335 28869079 ~ 28933084 (+) False LOC122334478
XM_043232444.1 mRNA downstream 37336 28869080 ~ 28933084 (+) False LOC122334478
TU36019 other upstream 49096 28707313 ~ 28708599 (+) False LOC122341395
XR_006248835.1 other upstream 110603 28592815 ~ 28647092 (+) False LOC122334878
TU35969 other upstream 197371 28515643 ~ 28560324 (+) True G24115
TU35581 other upstream 1475289 27281849 ~ 27282406 (+) False LOC122335546
TU35317 other upstream 1910338 26846723 ~ 26847357 (+) True G23695
TU36055 other downstream 12097 28843841 ~ 28846292 (+) False LOC122335482
TU36269 other downstream 397009 29228753 ~ 29230230 (+) False cenpx
TU36401 other downstream 560174 29391918 ~ 29401266 (+) False LOC122335632
TU36421 other downstream 608205 29439949 ~ 29442655 (+) False LOC122335508
TU36431 other downstream 667779 29499523 ~ 29500119 (+) True G24436

Expression Profile