RNA id: TU36066


Basic Information

Item Value
RNA id TU36066
length 421
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G24175
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28867616 ~ 28868036 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACAATGTTCAAGCTCAAATTGTAAGGTGGaccatttacacaaacacataaatatgaATGTCCAGCTCTCTCCTCAGAGATACAAGATACAGTTTTGTTTCCTTTGACTCATTCTATatctacatatatttacattctgTACACATGGTCACAGCGACGAGGAGAAAAATACAACGCATTAAATGTTTACCACAAGGTCAGATTTGGGAGAATAATAATGTAGCATTTACGTTTTTtggatatttattttggaatttCGCCCAAAGAACTGTGCGTTAGACCTGTACATTACATCTCAAACATTACGAagccaaaagaaaaacataaattagaTGTGTGatttcaatatattatttaggTAGATATAGATTATACActaagatatttatttaaaggcgCATTACATCTTTGAAGAGCACATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36065 lncRNA upstream 2757 28864644 ~ 28864859 (+) True G24174
TU36063 lncRNA upstream 5114 28862273 ~ 28862502 (+) True G24172
TU36061 lncRNA upstream 8480 28858885 ~ 28859136 (+) True G24170
TU36060 lncRNA upstream 12445 28854963 ~ 28855171 (+) True G24169
TU36034 lncRNA upstream 35872 28757695 ~ 28831744 (+) True G24146
TU36067 lncRNA downstream 758 28868794 ~ 28869074 (+) True G24176
TU36071 lncRNA downstream 1124 28869160 ~ 28874288 (+) False LOC122334478
TU36193 lncRNA downstream 100479 28968515 ~ 29014908 (+) True G24267
TU36194 lncRNA downstream 118101 28986137 ~ 28986430 (+) True G24268
TU36196 lncRNA downstream 141446 29009482 ~ 29018503 (+) True G24270
XM_043233373.1 mRNA upstream 21241 28843814 ~ 28846375 (+) False LOC122335482
XM_043233380.1 mRNA upstream 21241 28843820 ~ 28846375 (+) False LOC122335482
XM_043233367.1 mRNA upstream 21241 28843825 ~ 28846375 (+) True LOC122335482
XM_043232741.1 mRNA upstream 36880 28826613 ~ 28830736 (+) True otop2
XM_043232840.1 mRNA upstream 49514 28816578 ~ 28818102 (+) True amn
XM_043232488.1 mRNA downstream 1043 28869079 ~ 28933084 (+) False LOC122334478
XM_043232444.1 mRNA downstream 1044 28869080 ~ 28933084 (+) False LOC122334478
XM_043232460.1 mRNA downstream 1044 28869080 ~ 28933084 (+) False LOC122334478
XM_043232496.1 mRNA downstream 1044 28869080 ~ 28933084 (+) False LOC122334478
XM_043232503.1 mRNA downstream 1044 28869080 ~ 28933084 (+) False LOC122334478
TU36055 other upstream 21324 28843841 ~ 28846292 (+) False LOC122335482
TU36019 other upstream 159017 28707313 ~ 28708599 (+) False LOC122341395
XR_006248835.1 other upstream 220524 28592815 ~ 28647092 (+) False LOC122334878
TU35969 other upstream 307292 28515643 ~ 28560324 (+) True G24115
TU35581 other upstream 1585210 27281849 ~ 27282406 (+) False LOC122335546
TU36269 other downstream 360717 29228753 ~ 29230230 (+) False cenpx
TU36401 other downstream 523882 29391918 ~ 29401266 (+) False LOC122335632
TU36421 other downstream 571913 29439949 ~ 29442655 (+) False LOC122335508
TU36431 other downstream 631487 29499523 ~ 29500119 (+) True G24436

Expression Profile