RNA id: TU36196


Basic Information

Item Value
RNA id TU36196
length 267
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G24270
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29009482 ~ 29018503 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aatcttggttaacttataatattgtctgaaataacttttctagtaggttagtgacttctgaggttttccgcattgttggtgtgctagggtgagtcagatcaacgatcgatggatggagccgtctggagatcttgacttctggccaccaaactggcttagcatgctattacttagggagcGCATAAAAAATTAGCCTTTTTgtgtctatcgaggagatggctgcattaaggtaagcgatctacggggtagcctctgactaagacctgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36194 lncRNA upstream 23052 28986137 ~ 28986430 (+) True G24268
TU36071 lncRNA upstream 135194 28869160 ~ 28874288 (+) False LOC122334478
TU36067 lncRNA upstream 140408 28868794 ~ 28869074 (+) True G24176
TU36066 lncRNA upstream 141446 28867616 ~ 28868036 (+) True G24175
TU36065 lncRNA upstream 144623 28864644 ~ 28864859 (+) True G24174
TU36200 lncRNA downstream 33929 29052432 ~ 29054413 (+) False LOC122341401
TU36201 lncRNA downstream 33929 29052432 ~ 29054413 (+) False LOC122341401
TU36202 lncRNA downstream 42306 29060809 ~ 29073755 (+) False LOC122335397
TU36205 lncRNA downstream 102243 29120746 ~ 29126066 (+) True G24278
TU36214 lncRNA downstream 112660 29131163 ~ 29141577 (+) True G24286
XM_043232808.1 mRNA upstream 46940 28957657 ~ 28962542 (+) True fscn2a
XM_043232452.1 mRNA upstream 76398 28869765 ~ 28933084 (+) False LOC122334478
XM_043234732.1 mRNA downstream 29775 29048278 ~ 29054414 (+) True LOC122341401
XM_043233246.1 mRNA downstream 42272 29060775 ~ 29073746 (+) True LOC122335397
XM_043232698.1 mRNA downstream 196624 29215127 ~ 29225079 (+) True LOC122334787
XM_043232703.1 mRNA downstream 196624 29215127 ~ 29225079 (+) False LOC122334787
XM_043232700.1 mRNA downstream 196624 29215127 ~ 29225056 (+) False LOC122334787
TU36055 other upstream 163190 28843841 ~ 28846292 (+) False LOC122335482
TU36019 other upstream 300883 28707313 ~ 28708599 (+) False LOC122341395
XR_006248835.1 other upstream 362390 28592815 ~ 28647092 (+) False LOC122334878
TU35969 other upstream 449158 28515643 ~ 28560324 (+) True G24115
TU35581 other upstream 1727076 27281849 ~ 27282406 (+) False LOC122335546
TU36269 other downstream 210250 29228753 ~ 29230230 (+) False cenpx
TU36401 other downstream 373415 29391918 ~ 29401266 (+) False LOC122335632
TU36421 other downstream 421446 29439949 ~ 29442655 (+) False LOC122335508
TU36431 other downstream 481020 29499523 ~ 29500119 (+) True G24436

Expression Profile