RNA id: TU36327


Basic Information

Item Value
RNA id TU36327
length 287
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G24359
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29272032 ~ 29272318 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCATGAGACACATATCTTCAGAGAGCACCTCTTGTAGTGCGGTGGTGAGTTACGGCAAAGACCTGTTCATTGCTGTGATGAGTAGCTCCAACAACAGTAACGTTATCCCCAATGTCATGCTGCCATGTGTGACGGGGCCCCTTCGAGAAGGTGTAGCAGAAGTAAAGATCCATCTGTGAGTGATTTAATGGCTACAGTTCCAAAGATGACGTGTAATAAAATGGGAGGTATGGGTCAAAGTGACTAGACTGAATTAGGGACAGACCCTTTCCTTCTGAGTCCACCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36260 lncRNA upstream 68223 29195090 ~ 29203809 (+) True G24317
TU36257 lncRNA upstream 69171 29195090 ~ 29202861 (+) False G24317
TU36258 lncRNA upstream 69171 29195090 ~ 29202861 (+) False G24317
TU36259 lncRNA upstream 69171 29195090 ~ 29202861 (+) False G24317
TU36214 lncRNA upstream 130455 29131163 ~ 29141577 (+) True G24286
TU36347 lncRNA downstream 26492 29298810 ~ 29299048 (+) False LOC122335232
TU36353 lncRNA downstream 33344 29305662 ~ 29305948 (+) False LOC122335232
TU36355 lncRNA downstream 40411 29312729 ~ 29318597 (+) True G24386
TU36376 lncRNA downstream 75417 29347735 ~ 29348652 (+) True G24398
TU36374 lncRNA downstream 75464 29347782 ~ 29348652 (+) False G24398
XM_043233420.1 mRNA upstream 41801 29228716 ~ 29230231 (+) True cenpx
XM_043233410.1 mRNA upstream 43946 29224992 ~ 29228086 (+) True LOC122335520
XM_043233409.1 mRNA upstream 43946 29224992 ~ 29228086 (+) False LOC122335520
XM_043232698.1 mRNA upstream 46953 29215127 ~ 29225079 (+) True LOC122334787
XM_043232703.1 mRNA upstream 46953 29215127 ~ 29225079 (+) False LOC122334787
XM_043232807.1 mRNA downstream 2335 29274653 ~ 29283738 (+) True notum1a
XM_043233117.1 mRNA downstream 12374 29284692 ~ 29287182 (+) True LOC122335289
XM_043233102.1 mRNA downstream 15820 29288138 ~ 29291444 (+) True pycr1a
XM_043233049.1 mRNA downstream 26390 29298708 ~ 29306240 (+) True LOC122335232
XM_043233202.1 mRNA downstream 49030 29321348 ~ 29324920 (+) False LOC122335371
TU36269 other upstream 41802 29228753 ~ 29230230 (+) False cenpx
TU36055 other upstream 425740 28843841 ~ 28846292 (+) False LOC122335482
TU36019 other upstream 563433 28707313 ~ 28708599 (+) False LOC122341395
XR_006248835.1 other upstream 624940 28592815 ~ 28647092 (+) False LOC122334878
TU35969 other upstream 711708 28515643 ~ 28560324 (+) True G24115
TU36401 other downstream 119600 29391918 ~ 29401266 (+) False LOC122335632
TU36421 other downstream 167631 29439949 ~ 29442655 (+) False LOC122335508
TU36431 other downstream 227205 29499523 ~ 29500119 (+) True G24436

Expression Profile