RNA id: TU36353


Basic Information

Item Value
RNA id TU36353
length 208
lncRNA type sense_over
GC content 0.48
exon number 2
gene id LOC122335232
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29298708 ~ 29306240 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATTTACTGCAGTGCGATTTTCAGTATCATTGGCATCAGCATTCTGGAGACCATCCTGGTGAATCTTCTAAAGGCTAAAGGTGGAGAAAAAAGAGCAGTGGAAACAACAGCTGTTGAGCGAGATACGAATGTAGGAGACCAGCAGAGCCCTCCAGACTCAGTTGGAGACCAGCATGGGATGCAGAGATCTCTGTGCTGGATCAGAGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36347 lncRNA upstream 6614 29298810 ~ 29299048 (+) False LOC122335232
TU36327 lncRNA upstream 33344 29272032 ~ 29272318 (+) True G24359
TU36260 lncRNA upstream 101853 29195090 ~ 29203809 (+) True G24317
TU36257 lncRNA upstream 102801 29195090 ~ 29202861 (+) False G24317
TU36355 lncRNA downstream 6781 29312729 ~ 29318597 (+) True G24386
TU36376 lncRNA downstream 41787 29347735 ~ 29348652 (+) True G24398
TU36374 lncRNA downstream 41834 29347782 ~ 29348652 (+) False G24398
TU36395 lncRNA downstream 57603 29363551 ~ 29363768 (+) True G24406
XR_006248986.1 lncRNA downstream 85970 29391918 ~ 29393838 (+) False LOC122335632
XM_043233102.1 mRNA upstream 14218 29288138 ~ 29291444 (+) True pycr1a
XM_043233117.1 mRNA upstream 18480 29284692 ~ 29287182 (+) True LOC122335289
XM_043232807.1 mRNA upstream 21924 29274653 ~ 29283738 (+) True notum1a
XM_043233420.1 mRNA upstream 75431 29228716 ~ 29230231 (+) True cenpx
XM_043233409.1 mRNA upstream 77576 29224992 ~ 29228086 (+) False LOC122335520
XM_043233202.1 mRNA downstream 15400 29321348 ~ 29324920 (+) False LOC122335371
XM_043233212.1 mRNA downstream 15566 29321514 ~ 29324920 (+) True LOC122335371
XM_043233404.1 mRNA downstream 134007 29439955 ~ 29442973 (+) True LOC122335508
XM_043232687.1 mRNA downstream 385359 29691307 ~ 29725107 (+) True LOC122334720
XM_043232684.1 mRNA downstream 467937 29773885 ~ 29785104 (+) False LOC122334671
TU36269 other upstream 75432 29228753 ~ 29230230 (+) False cenpx
TU36055 other upstream 459370 28843841 ~ 28846292 (+) False LOC122335482
TU36019 other upstream 597063 28707313 ~ 28708599 (+) False LOC122341395
XR_006248835.1 other upstream 658570 28592815 ~ 28647092 (+) False LOC122334878
TU35969 other upstream 745338 28515643 ~ 28560324 (+) True G24115
TU36401 other downstream 85970 29391918 ~ 29401266 (+) False LOC122335632
TU36421 other downstream 134001 29439949 ~ 29442655 (+) False LOC122335508
TU36431 other downstream 193575 29499523 ~ 29500119 (+) True G24436

Expression Profile