RNA id: TU36433



Basic Information


Item Value
RNA id TU36433
length 813
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G24438
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29500518 ~ 29501330 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


caacaacgatgagactgcctacagagaagaggtccagcatctggccacgtggtgcaaagacaataatctgctccttaacaccaccaaaaccaaggagctcattgtggacttcaggaaggtgagaagaggcacacatgatcccatccacattaatgggattgctgtggagcctgtctcatgcatcaagttcctgggaacccacatctctgaagatctgtcctggaccaccaacacctccagcctggtcaagaaggctcaccagcgtttattctttctgaggaaacttaagaagaaccagctgtcctcagccatcctggtgaacttctatcgctgtacaatagagagcatcctaacaaactgtgtcacagtctggtatgggagctgctctgttgctgagcgtaaggcactgcagcgggtggtgaaaactgcccagcgcatcaccggaactccacttccatccattgaggacatccagaagaaacactgtttgcgtcgagcacgcagtattcttaaggactcctctcaccctgcccacaaactgttttccctcctgccatctggcaggcgattcagattcccccggactagaacaagtagactgaggaacagcttttcaccagagctgtctcactactgaattctacccccactgatgtctgccccacccaccccattaaaacaaaaatacaaaaatgcactgttaacattcattgcactccactgtatatatctttgtaaatgtatgtacatatccactgtacatactcttgtaaaattgtctatacatatcctgtatatcctgctctttctttc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006248987.1 lncRNA upstream 97915 29391928 ~ 29402603 (+) False LOC122335632
TU36404 lncRNA upstream 99252 29391918 ~ 29401266 (+) True LOC122335632
XR_006248986.1 lncRNA upstream 106680 29391918 ~ 29393838 (+) False LOC122335632
TU36395 lncRNA upstream 136750 29363551 ~ 29363768 (+) True G24406
TU36376 lncRNA upstream 151866 29347735 ~ 29348652 (+) True G24398
XR_006248994.1 lncRNA downstream 224864 29726194 ~ 29746875 (+) True LOC122335675
TU36461 lncRNA downstream 313289 29814619 ~ 29815647 (+) True G24464
XR_006248675.1 lncRNA downstream 420205 29921535 ~ 29922299 (+) True LOC122333787
XR_006250524.1 lncRNA downstream 421835 29923165 ~ 29924120 (+) True LOC122342119
TU36561 lncRNA downstream 437093 29938423 ~ 29938813 (+) True G24546
XM_043233404.1 mRNA upstream 57545 29439955 ~ 29442973 (+) True LOC122335508
XM_043233202.1 mRNA upstream 175598 29321348 ~ 29324920 (+) False LOC122335371
XM_043233212.1 mRNA upstream 175598 29321514 ~ 29324920 (+) True LOC122335371
XM_043233049.1 mRNA upstream 194278 29298708 ~ 29306240 (+) True LOC122335232
XM_043233102.1 mRNA upstream 209074 29288138 ~ 29291444 (+) True pycr1a
XM_043232687.1 mRNA downstream 189977 29691307 ~ 29725107 (+) True LOC122334720
XM_043232684.1 mRNA downstream 272555 29773885 ~ 29785104 (+) False LOC122334671
XM_043232683.1 mRNA downstream 272830 29774160 ~ 29785104 (+) True LOC122334671
XM_043232685.1 mRNA downstream 272830 29774160 ~ 29785104 (+) False LOC122334671
XM_043234738.1 mRNA downstream 414923 29916253 ~ 29921491 (+) True LOC122341412
TU36431 other upstream 399 29499523 ~ 29500119 (+) True G24436
TU36421 other upstream 57863 29439949 ~ 29442655 (+) False LOC122335508
TU36401 other upstream 99252 29391918 ~ 29401266 (+) False LOC122335632
TU36269 other upstream 270288 29228753 ~ 29230230 (+) False cenpx
TU36055 other upstream 654226 28843841 ~ 28846292 (+) False LOC122335482

Expression Profile