Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043225706.1 |
| length | 1316 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | hoxb7a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 22707994 ~ 22712057 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K09307 | HOX_7; homeobox protein HoxA/B7 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33156 | lncRNA | upstream | 35083 | 22598018 ~ 22672911 (+) | False | G22340 |
| TU33157 | lncRNA | upstream | 67632 | 22511428 ~ 22640362 (+) | True | G22340 |
| TU33113 | lncRNA | upstream | 371773 | 22288141 ~ 22336221 (+) | False | hdac5 |
| TU33114 | lncRNA | upstream | 420949 | 22269177 ~ 22287045 (+) | False | hdac5 |
| TU33106 | lncRNA | upstream | 643894 | 22035917 ~ 22064100 (+) | False | LOC122341843 |
| TU33382 | lncRNA | downstream | 11987 | 22724044 ~ 22725888 (+) | False | hoxb5a |
| TU33399 | lncRNA | downstream | 53689 | 22765746 ~ 22766130 (+) | False | hoxb2a |
| TU33447 | lncRNA | downstream | 187276 | 22899333 ~ 22903541 (+) | False | LOC122341356 |
| TU33448 | lncRNA | downstream | 187276 | 22899333 ~ 22901102 (+) | False | LOC122341356 |
| TU33452 | lncRNA | downstream | 193685 | 22905742 ~ 22906695 (+) | False | LOC122341356 |
| XM_043228340.1 | mRNA | upstream | 1257 | 22703924 ~ 22706737 (+) | True | hoxb8a |
| XM_043228350.1 | mRNA | upstream | 1257 | 22703945 ~ 22706737 (+) | False | hoxb8a |
| XM_043235998.1 | mRNA | upstream | 8823 | 22691178 ~ 22699171 (+) | True | hoxb9a |
| XM_043225470.1 | mRNA | upstream | 18303 | 22685013 ~ 22689691 (+) | True | hoxb10a |
| XM_043235467.1 | mRNA | upstream | 32874 | 22673476 ~ 22675120 (+) | True | hoxb13a |
| XM_043230185.1 | mRNA | downstream | 1816 | 22713873 ~ 22765536 (+) | False | hoxb3a |
| XM_043230258.1 | mRNA | downstream | 1816 | 22713873 ~ 22765536 (+) | False | hoxb3a |
| XM_043230303.1 | mRNA | downstream | 7403 | 22719460 ~ 22721579 (+) | True | hoxb6a |
| XM_043230282.1 | mRNA | downstream | 9965 | 22722022 ~ 22726158 (+) | True | hoxb5a |
| XM_043230208.1 | mRNA | downstream | 14819 | 22726876 ~ 22765536 (+) | False | hoxb3a |
| TU33136 | other | upstream | 160786 | 22546158 ~ 22547208 (+) | True | G22329 |
| TU33161 | other | upstream | 177934 | 22528989 ~ 22530060 (+) | True | G22344 |
| XR_006248300.1 | other | upstream | 682083 | 21976509 ~ 22025911 (+) | False | wnk4b |
| TU33098 | other | upstream | 731329 | 21975252 ~ 21976665 (+) | True | G22301 |
| XR_006248723.1 | other | upstream | 973867 | 21637743 ~ 21734127 (+) | False | crhr1 |
| TU33451 | other | downstream | 193320 | 22905377 ~ 22906695 (+) | False | LOC122341356 |
| TU33550 | other | downstream | 446192 | 23158249 ~ 23163716 (+) | False | prr15la |
| XR_006250499.1 | other | downstream | 691384 | 23403441 ~ 23408814 (+) | True | LOC122341907 |
| unassigned_transcript_294 | other | downstream | 1124042 | 23836099 ~ 23836180 (+) | True | trnas-aga_1 |
| TU34051 | other | downstream | 1338182 | 24050239 ~ 24051863 (+) | False | LOC122342055 |
