RNA id: XM_043229144.1



Basic Information


Item Value
RNA id XM_043229144.1
length 618
RNA type mRNA
GC content 0.49
exon number 3
gene id hbbe1.1
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9789355 ~ 9790164 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


aactctctctctccacagcaCTCTTTAGCATCCGTTCAAGGCACTCAGTCTGAACATCTAAAGTCGGAAACATGGTTGAGTGGACAGACTTTGAGAGGACCACCATCCAGGACATCTTCTCCAAGATGAACTACGAAGTCGTTGGTCAGCAGGCTCTGGCAAGATGTCTCATCGTTTACCCCTGGACCCAGAGGTACTTTGGCAAGTTCGGTAACCTGTACAACGCCTCTGCCATCATGGGAAACCCCATGGTTGCTGCTCACGGAGCAGTCGTGCTCCACGGCCTGGACAAAGCTGTGAAGAACATGGACAACATCAAAGCCGCCTATGCTGAACTGAGCGTGCTGCACTCCGAGAAGCTCCACGTAGATCCTGACAACTTCAGGCTTTTGGGTGACTGCCTGACCATCGTTGTTGCTGGACAGCTGGGCTCTGGATTCACCCCTGAGGTCCAGGCCGCTTTCCAGAAATTCCTCGCCGTCGTGGTCTCATCTCTTCAGAGACAGTACCACTAGAAACAAAACCCGTTTTAACTGCAGAGAAGATCATCTGATGTTTAAACAAAAGAGTGTGTTCTTCTGAGttgaagcaaataaatatttcagtattcaaTATGTA

Function


GO: NA

KEGG:

id description
K13825 HBE; hemoglobin subunit epsilon

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU27622 lncRNA upstream 4897 9775320 ~ 9784458 (+) True G18502
TU27582 lncRNA upstream 186291 9602642 ~ 9603064 (+) True G18470
TU27569 lncRNA upstream 213453 9574881 ~ 9575902 (+) True G18458
TU27627 lncRNA downstream 64439 9854603 ~ 9859173 (+) True G18507
TU27641 lncRNA downstream 75622 9865786 ~ 9943153 (+) True G18517
TU27691 lncRNA downstream 120793 9910957 ~ 9911612 (+) True G18549
TU27728 lncRNA downstream 243977 10034141 ~ 10103461 (+) False G18574
TU27867 lncRNA downstream 483810 10273974 ~ 10302050 (+) True G18671
XM_043235166.1 mRNA upstream 3232 9785282 ~ 9786123 (+) True LOC122341659
XM_043235569.1 mRNA upstream 10065 9778492 ~ 9779290 (+) True hbaa2
XM_043235218.1 mRNA upstream 28171 9755181 ~ 9761184 (+) True mpg
XM_043233977.1 mRNA upstream 91440 9692949 ~ 9697915 (+) True aanat2
XM_043235156.1 mRNA upstream 96718 9679898 ~ 9692637 (+) False mgrn1b
XM_043228471.1 mRNA downstream 2492 9792656 ~ 9793389 (+) True hbbe1.2
XM_043228772.1 mRNA downstream 5625 9795789 ~ 9796532 (+) True LOC122331228
XM_043229722.1 mRNA downstream 8898 9799062 ~ 9799796 (+) False hbbe1.3
XM_043230173.1 mRNA downstream 13409 9803573 ~ 9804386 (+) True LOC122332778
XM_043233845.1 mRNA downstream 70299 9860463 ~ 9862540 (+) False angptl8
TU27611 other upstream 39475 9739796 ~ 9749880 (+) True G18491
TU27599 other upstream 92796 9694632 ~ 9696559 (+) False aanat2
TU27323 other upstream 603695 9184528 ~ 9185660 (+) False LOC122341719
TU27325 other upstream 603774 9184528 ~ 9185581 (+) False LOC122341719
TU26987 other upstream 1238204 8544460 ~ 8551151 (+) False LOC122331854
TU27625 other downstream 8651 9798815 ~ 9799755 (+) True hbbe1.3
TU27725 other downstream 235654 10025818 ~ 10034467 (+) True G18574
TU28036 other downstream 962595 10752759 ~ 10781853 (+) False kcna7
TU28033 other downstream 988642 10778806 ~ 10781853 (+) False kcna7
XR_006250543.1 other downstream 1372190 11162354 ~ 11162443 (+) True LOC122342197

Expression Profile