Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043229924.1 |
| length | 10048 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 33 |
| gene id | notch3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 9265773 ~ 9294849 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0007219 | Notch signaling pathway | biological_process |
| GO:0048514 | blood vessel morphogenesis | biological_process |
| GO:0048793 | pronephros development | biological_process |
| GO:0035019 | somatic stem cell population maintenance | biological_process |
| GO:0021865 | obsolete symmetric radial glial cell division in forebrain | biological_process |
| GO:0048259 | regulation of receptor-mediated endocytosis | biological_process |
| GO:0097150 | neuronal stem cell population maintenance | biological_process |
| GO:0001840 | neural plate development | biological_process |
| GO:0021654 | rhombomere boundary formation | biological_process |
| GO:0014003 | oligodendrocyte development | biological_process |
| GO:0050768 | negative regulation of neurogenesis | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0048936 | peripheral nervous system neuron axonogenesis | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU27489 | lncRNA | downstream | 66071 | 9198608 ~ 9199702 (-) | True | G18388 |
| TU27477 | lncRNA | downstream | 82502 | 9182539 ~ 9183271 (-) | True | G18378 |
| TU27434 | lncRNA | downstream | 128381 | 9134105 ~ 9137392 (-) | True | LOC122331343 |
| TU27443 | lncRNA | downstream | 128381 | 9134105 ~ 9137392 (-) | False | LOC122331343 |
| TU27431 | lncRNA | downstream | 131960 | 9133614 ~ 9133813 (-) | True | G18357 |
| TU27528 | lncRNA | upstream | 118555 | 9413404 ~ 9414007 (-) | True | G18426 |
| TU27547 | lncRNA | upstream | 186472 | 9481321 ~ 9485355 (-) | True | G18439 |
| XR_006250528.1 | lncRNA | upstream | 217597 | 9512446 ~ 9533787 (-) | True | LOC122342127 |
| XR_006250529.1 | lncRNA | upstream | 237868 | 9532717 ~ 9533787 (-) | False | LOC122342127 |
| TU27754 | lncRNA | upstream | 276751 | 9571600 ~ 9571805 (-) | True | G18599 |
| XM_043235697.1 | mRNA | downstream | 5282 | 9255441 ~ 9260491 (-) | True | shfl |
| XM_043235698.1 | mRNA | downstream | 11365 | 9252311 ~ 9254408 (-) | True | soul5 |
| XM_043235696.1 | mRNA | downstream | 14550 | 9246376 ~ 9251223 (-) | True | nr5a5 |
| XM_043228895.1 | mRNA | downstream | 127684 | 9134043 ~ 9138089 (-) | False | LOC122331343 |
| XM_043229550.1 | mRNA | downstream | 132968 | 9129812 ~ 9132805 (-) | True | lpar2a |
| XM_043226026.1 | mRNA | upstream | 38247 | 9333096 ~ 9341003 (-) | True | rdh8a |
| XM_043235554.1 | mRNA | upstream | 243527 | 9538376 ~ 9563382 (-) | True | trip10a |
| XM_043235552.1 | mRNA | upstream | 268902 | 9563751 ~ 9569327 (-) | True | icam5 |
| XM_043235556.1 | mRNA | upstream | 274604 | 9569453 ~ 9577610 (-) | True | angptl6 |
| XM_043235264.1 | mRNA | upstream | 297466 | 9592315 ~ 9605013 (-) | True | dnmt1 |
| TU27085 | other | downstream | 866945 | 8309552 ~ 8398828 (-) | True | fmc1 |
| TU27088 | other | downstream | 954424 | 8309552 ~ 8311349 (-) | False | fmc1 |
| XR_006250544.1 | other | downstream | 1046718 | 8218902 ~ 8219055 (-) | True | LOC122342198 |
| TU27061 | other | downstream | 1056680 | 8207764 ~ 8209093 (-) | False | LOC122339740 |
| XR_006248283.1 | other | downstream | 1251072 | 8011441 ~ 8014701 (-) | True | LOC122331739 |
| TU27537 | other | upstream | 131723 | 9426572 ~ 9462905 (-) | True | G18433 |
| XR_006250486.1 | other | upstream | 1099465 | 10394314 ~ 10396341 (-) | True | eef2kmt |
| XR_006250541.1 | other | upstream | 1484252 | 10779101 ~ 10779235 (-) | True | LOC122342195 |
| XR_006250542.1 | other | upstream | 1485253 | 10780102 ~ 10780196 (-) | True | LOC122342196 |
| XR_006248663.1 | other | upstream | 1717087 | 11011936 ~ 11064583 (-) | False | lrrc4ba |
