RNA id: XM_043230027.1


Basic Information

Item Value
RNA id XM_043230027.1
length 1490
RNA type mRNA
GC content 0.45
exon number 11
gene id LOC122332643
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9084364 ~ 9089675 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

acgtAGCGAATGTATGTGTTAAATGTTTCCCATTGACATTTGAAGATGATGATTTCTGAATTAAGAAGATTTTTGGCTTGTTACTGGACCAACACAGATGTTCAAActgttgtttaaaatacattgcaGTGTGATGCCAACAACATCAATACCAGGGCCTCAGAAGTGTCTCATGGAGTCAAACGGCCGCTTGACAGTAGCCACATCTCAGGACCTCCTCAGAAGTCACCTTGCACGTCTCCCGCTCCCGCAGCGATGCAGCATATCGGAGAGGATGAGCGCCGGGAGGACTCTAAGATGAGCTCTGTTGAGGAGAGTGTGAGGGAAGGTGTGACAGCTACTGCTCCAGAACGAAGCCCTCGCTCACGGAGGAAATCCTGGAGGAGATCGTCCAGAGGCAGACGCTCTCTGCCGGCCTTCTCCTGCTCCTCACAGCCTCTGTGTGAAACCATCAGTCTGTCTTTGCCTGATAATGAGAGGCTGGAGATGCTAATTAAAGCTGCTATGCAGATGACAGTGAAGAGGGCCAAAAATAGTCTGTACACTGTTCCCGGTGTTGATACAGAGATACTCCAGACTCAAGTTGAATCTTTGCATGAAGAATGGGACAGTCTGGCTAAAGACATCAAAAGAGAAACCCAGGCTTCACTTTCAGCCGTTGAGAGTGACCCTGTTGTTAACATGAACGCTGCGCTCATTCAGGAGGACATTAACAGGTTACAGGCAGAAAGTATGTCGTGGGAGTCGCTTTTGAACAAACATAGAATCAAAGCTGACGAGCTAGACAAATGTGTGGAGCGAGGGGAAGAGAAGGGGGTGCCGCTGGACCCGTCGTGCTTTGCAAAGTCCTCACAGAGTCAGCTCATTATGAACAAACCTGACTACAATGCGGTACTCGCGGGACAGCAAAAGCTGCTCAGAAACATGGAGCTAGTGATGGACTCACAGTGTTGTATAATGAGGGAGCTGCTGTCTTTTCATGAGAAGTCACAGCTGCTGCTAAAAGAGACCAGTGCCAGACTAGCTGCCAGGGCAGGATTTCAGAATCTCCCTTCATCTCCAGtcagacagctgataaaaggACCCATATCTAGCGTTTCCTCCTAGTTTACAGTGCCGTAATGAATCCCATAGGATGCTGAGCTTCCACACAAAAGCCCTACGATCTGATAGGACCATTGCGGTTATGCATTATGTTTCGTTTCAACTTTTAGCTGTATCGCAACAcgtatcctttttttttttttttttttttttttttaaagagcatcTAAATTCATACTAAACCTCTGTATGTCTGTTTTGGATTTAGTCCATTTAAATGCTCCGAATGCGTACATGAAGCGCAAAGATGAACACTAGATGGCAGGCTAGTTATTCACCTAGTTCTTCAAAGCTCCACTTTAACCTGTGTAGTTTTGCATAGATTTTGTTTCTCTCAATTTGAcagatttctaaatataattaaatgcctTGACAATTGCTTCAaa

Function

GO: NA

KEGG:

id description
K11544 DSN1; kinetochore-associated protein DSN1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27303 lncRNA upstream 72329 9011693 ~ 9012178 (+) False pgls
TU27283 lncRNA upstream 95897 8987053 ~ 8988610 (+) False LOC122341292
TU27278 lncRNA upstream 202385 8881198 ~ 8882122 (+) True G18261
TU26937 lncRNA upstream 342205 8514149 ~ 8742302 (+) False G18048
TU27339 lncRNA downstream 92865 9182540 ~ 9183276 (+) False brd4
TU27326 lncRNA downstream 94724 9184399 ~ 9185581 (+) True LOC122341719
TU27353 lncRNA downstream 160424 9250099 ~ 9250630 (+) True G18303
TU27355 lncRNA downstream 172295 9261970 ~ 9262239 (+) True G18305
TU27527 lncRNA downstream 323969 9413644 ~ 9414007 (+) True G18425
XM_043235532.1 mRNA upstream 1032 9067646 ~ 9083475 (+) True atp13a1
XM_043225839.1 mRNA upstream 20360 9043438 ~ 9064147 (+) True lmx1al
XM_043234664.1 mRNA upstream 42974 9024378 ~ 9041533 (+) True LOC122341294
XM_043225627.1 mRNA upstream 62861 9013095 ~ 9021646 (+) True colgalt1a
XM_043225635.1 mRNA upstream 72392 9010050 ~ 9012115 (+) True pgls
XM_043229555.1 mRNA downstream 4140 9093815 ~ 9127734 (+) True pbx4
XM_043233736.1 mRNA downstream 48792 9138467 ~ 9183290 (+) False brd4
XM_043233737.1 mRNA downstream 49443 9139118 ~ 9183290 (+) False brd4
XM_043233732.1 mRNA downstream 63760 9153435 ~ 9183290 (+) False brd4
XM_043233729.1 mRNA downstream 63760 9153435 ~ 9183290 (+) True brd4
TU26907 other upstream 521131 8260084 ~ 8563376 (+) False LOC122342110
TU26987 other upstream 533356 8544460 ~ 8551151 (+) False LOC122331854
TU26936 other upstream 559773 8513349 ~ 8524734 (+) True G18048
TU26932 other upstream 568053 8513349 ~ 8516454 (+) False G18048
TU26858 other upstream 931682 8150770 ~ 8152825 (+) False LOC122341282
TU27323 other downstream 94853 9184528 ~ 9185660 (+) False LOC122341719
TU27325 other downstream 94853 9184528 ~ 9185581 (+) False LOC122341719
TU27599 other downstream 604957 9694632 ~ 9696559 (+) False aanat2
TU27611 other downstream 650121 9739796 ~ 9749880 (+) True G18491
TU27625 other downstream 709140 9798815 ~ 9799755 (+) True hbbe1.3

Expression Profile