RNA id: XM_043230452.1


Basic Information

Item Value
RNA id XM_043230452.1
length 3779
RNA type mRNA
GC content 0.45
exon number 4
gene id wnt9b
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14584130 ~ 14592582 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTTTCGGCCCCTTTAAGAAGTTGAGCTGTCCAGCACAGCTGGGATTTCAACACGGACAGATAGCGCAATGAAGAGCAGCGTCGACCCGTCATCATGTGCACCGGGCTTCCGAGGACTGCCTGTCCGCTGCGACTTTTTGCCCTCTGCATCCTTCTCTCCCACGCAGCAGCCTATTTCGGCCTTACAGGTCGCGAGCCACTGGTTTTTCTGCCCGGTCCATTTGCCAACGAGCCTACGAACGGTAAAGCGCACCTGAAACAATGCGAGCAGATGACTTTGACGCGCCGGCAAAAGCGCTTGTGCCGGAGAGAACCGGGGCTGGCGGAGACTCTGAGGGAATCTGTCCGCCTCAGCCTGCTGGAGTGCCGCTATCAGTTCCGCAACGAGCGCTGGAACTGTAGTATGGATGGCCGTGGAAGCCTTTTAAAACGAGGCTTTAAAGAGACGGCCTTCCTGCTCGCGGTGTCGTCGGCGGCGTTGTCGCACGCGCTGGCCAAAGCGTGCAGCTCGGGGCGGATGGAGCGCTGCACCTGCGACGATTCTCCTGGCCTGCAGCACCGCGAGGCCTGGCAGTGGGGCGTATGCGGCGACAACCTCAAATACAGCACTAAGTTTCTCAAGAAATTCTTGGGGCAAAAACGGGTCAGCAAGGACCTGCGTGCCCAAATCGACGCTCACAACATTAACGTCGGCATCAGGGCTGTCAAGAGTGGTCTCAAAACTACTTGTAAGTGTCACGGTGTTTCCGGTTCGTGTGCTGTGAGAACATGCTGGAAGCAGCTCTCCCCTTTTCAAGACACAGGCCATCTTCTGAAGTATCGCTATGACACAGCTGTTCGAGTGCATAGCGTTACCAACTCCGCTACTGGAGAGACAGAGCTGGCAAGCCCACGGCGCCACAGCAACACAGGTCCCCGTCTGCGACCCACCGAGCTGGTATTTCTGGAGGAGTCACCCAGCTTTTGCAGGCCTTCGCGGTACTCCCCTGGGACGGCCGGCAGACCATGTTCAAAGGACACTAGCTGCAGCAGTCTTTGCTGCGGACGGGGCTACAACACGGCCCTCCGCCTCACCACCCTCTCCTGCCACTGCCAGGTCCGCTGGTGCTGTCACGTCGAGTGTCAAACCTGCCTCCGAGAGGAAGAGGTCTACACCTGCAAGAAACACTGATAGCAAGAAGGAGACTGGACATTGAGGAAGTTCGAGGAATTTTTATGCGTCGGCCAGACAACTAGTAGAAGTGTGAGAGGTTGTGATAAGGGAAAAGATGTTGAGGATGATCTGCCAGTCTTACCTGGCCTAATTGAAATGGATAAACCAAACTCTGGGCTCCCACATGGAGTTCCAAACAAAAGTTTAGGAGGAACGTGTTAATTTAATACGACCAATCAGTACCTGAACAAGCATATATAAGCCACTGCTTACTCACTTCTGCCTATGACAGTTCTTCCAGCGTTCCTCCACCACCCCAGCTCCAGCTCAGTTATCAGTTATCACAGACAAGAAAATACTACTTTCCGGCTTGGGTCAAGTCTCTAGCTCAATCCATTTACCGTGGAAAGCAAGTGAAATATGTACACCTCCTCTTCACTGAAGAGTACATGAACCCGTTAAGGCATGATACAAGTGGGGGCAAACCTGTCTCCAGAGAATTTGTGAGATGCTTGACTAGATTGAAATTTGCTCTTCTGCTGTCAAGGAAACTAAATGGGATGTTCCATATGTTTCCTAGTTTATTGGAGGTTTGAAATGAACCaggccactttttttttcttctgcagcaATAAACCAACCTCACTGGGAGGTTGCCTGTTGAACAGTCTGTGTTGATCGCACACGTGTGGCAGTGGACTAGAGATCTGCAATGTGTAGTTATACTCAAATTGATAGTTTGGAAGTGAGCTTGTACTGCTTGTACTGTATATCTCTCTATTGCTCTGAGAGTCCACATATGGCTTCAAAATATACTGCGAGTATGAAGCACttatcaatgcatttatttgttaatattacgATAGTCTTTTATATGTAGTGAAGAAAGTACTTGTGTCTGTTACggtatttacagtaataatgcttaaaaaaggTGGGGGAGTGGTCGTGCTGATAAACTGGAAATCTACTGGGACACATAGACTTCTAATGAATGTTAGAGAAagttatataataagaaatgttttatatattgaatGGCCATTAAATGGCTGTATCTGGTAATAGATAGGATTGTATTTATCGCAATTAGATAAAACCCATCAACTGCTGCACCGACTTTAAGTACACTTACTGGTGTATTCCAGACTGCATTCACAAATTTTAcacctttttatttacatttgtcatATTGCTGCATGATTTCCTGCTTTTCCCGTGTAGAAGAATGCCAAAAACACAAGCATTAGGGACCGATGAGAACGAAAGTGTGTCATTACAGCATGACCCAAACATCACCTCTCCTATACAGATGTGCAAACATCTGGGCTTCTGAGTATGTAGCCTTTATTCTACGTTTCCCATCAAGGGCAATGAGAGTGAGTATGTCCCATCCAGAACAAAGGAAAGCATCTCCTTCCCTAGTAAGCAAGGCTCTCTGGCCTATAAATTCTGCAAGCCCTTTCATGTGTATGAAGCCTTTGATAAAGTCCATTCCGGTCCCTTATTAGCCCATTACCAATCAGAGCAAATAACAGTGCTTTTTCTTCAGAATGTGCTGAAAGCAGAAAGATTTGAAAGTAGGTATGCTGGAAGCCCAATTGAGGCCTTTGTCACAgggatatttaattaaatttttattttttgtttatttttagcttcatttttatgtattaaattagctgtttattttacagttcttagttgtttggtttggtttggtttcgAAGACCAAATACCAGTGGAAATGTTGAAAATCAGTTCTGTAGGTGCACTGCACGTAAAGGCACATTTTAACTCAGACACAAAGTGTTACTCATAATtcttttctgttaaaatcaaacattacatgcatttattcactTAATAACTGAAACTCAAATTGAAAGTATGAGAATGTGAGCATGCACATGCCtacttttctgtgtgtgtgtgtgtgtgtttgtgtgcatggtGATTCTGGGAAGGCAGAAAACTGCCGTAAAATTGGCCACATCAATCAAGTGAAAGAAAGTCCAAGCGTTCAGTGACATGCCATTCAGCTGAAGCATTCGTAATGTCTAAAACGTTTGCTTCAGGGTTTCACTCTGACTCAGTTGAAGTTCATATGCATGGTATGAAAGTTTTCACCTGTAATTGATTCAGTTTCTATGAAAGAGACTGTACTGAAGAAAGAGAGTTCTCACACTGATTCAGCACATGCAAATATCTGAAACCACAACGGTGGCTGTGAAAATCCAAATGAGATTGTTTCCTACttcttaatgtgtgtgtttgtggatgtgAGTGTGCTTCTCTGCTGCAACTGATGAAATGGCAACATTTATAGCACAGACATCCCAAATGAACCTTCTCTGTCAACCAGCGGGTTATGGAgtctatgtgtttgtttgtgttgtcaTAGCTTTAACAGTGTAATGTTTCACTTCGTGATTTCACGCCGGGGATTTTTGCTACTACCTCACTCGGTCTATGGGGGAAATTAAATactaagatgtttttttcttactagATATTTAAGACAATGCTTCTTTTAAAAGCTTTAGCCTGAAATACAGATgcatttactctttttttttacttttgtgacCTATTTCCTTATTTAAGAACCAATTTATCATATTCAA

Function

GO:

id name namespace
GO:0030182 neuron differentiation biological_process
GO:0045165 cell fate commitment biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005615 extracellular space cellular_component
GO:0005109 frizzled binding molecular_function

KEGG:

id description
K01064 WNT9; wingless-type MMTV integration site family, member 9

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU29989 lncRNA upstream 126224 14379624 ~ 14457906 (+) True G20146
TU29987 lncRNA upstream 126224 14433705 ~ 14457906 (+) False G20146
TU29948 lncRNA upstream 279237 14303150 ~ 14304893 (+) True G20113
TU29877 lncRNA upstream 433172 14148464 ~ 14150958 (+) True G20057
TU29727 lncRNA upstream 461002 14120436 ~ 14123128 (+) True smim22
TU30016 lncRNA downstream 24680 14617262 ~ 14618834 (+) True G20166
TU30018 lncRNA downstream 34210 14626792 ~ 14629316 (+) True G20168
XR_006249714.1 lncRNA downstream 72260 14664842 ~ 14667052 (+) True LOC122338121
TU30044 lncRNA downstream 327663 14920245 ~ 14969285 (+) True G20180
TU30048 lncRNA downstream 378430 14971012 ~ 14971661 (+) True G20183
XM_043235900.1 mRNA upstream 128887 14440829 ~ 14455243 (+) True fmnl1a
XM_043234671.1 mRNA upstream 150538 14420262 ~ 14433592 (+) True LOC122341307
XM_043235239.1 mRNA upstream 182236 14397150 ~ 14401894 (+) True LOC122341695
XM_043234669.1 mRNA upstream 186985 14369095 ~ 14397145 (+) True LOC122341305
XM_043235862.1 mRNA upstream 256400 14313030 ~ 14327730 (+) False ezh1
XM_043235827.1 mRNA downstream 10592 14603174 ~ 14608724 (+) True gosr2
XM_043235121.1 mRNA downstream 50383 14642965 ~ 14657476 (+) False map3k14a
XM_043235122.1 mRNA downstream 53939 14646521 ~ 14657476 (+) True map3k14a
XM_043235120.1 mRNA downstream 54122 14646704 ~ 14657476 (+) False map3k14a
XM_043233827.1 mRNA downstream 76899 14669481 ~ 14671559 (+) True rps11
XR_006248644.1 other upstream 316339 14255490 ~ 14267791 (+) False abcc1
TU29797 other upstream 464560 14118467 ~ 14119570 (+) True G20015
TU29734 other upstream 531098 14049490 ~ 14053032 (+) True G19973
unassigned_transcript_286 other upstream 670436 13913623 ~ 13913694 (+) True trnat-cgu
TU29613 other upstream 881777 13698574 ~ 13702353 (+) False rbbp6
TU30017 other downstream 26412 14618994 ~ 14622858 (+) True G20167
TU30025 other downstream 72337 14664919 ~ 14671568 (+) True G20172
XR_006250545.1 other downstream 72904 14665486 ~ 14665570 (+) True LOC122342199
XR_006250536.1 other downstream 73256 14665838 ~ 14665922 (+) True LOC122342189
XR_006250538.1 other downstream 73864 14666446 ~ 14666529 (+) True LOC122342192

Expression Profile