Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043230602.1 |
| length | 1368 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | rdm1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 21926866 ~ 21929640 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006310 | DNA recombination | biological_process |
| GO:0006281 | DNA repair | biological_process |
| GO:0005730 | nucleolus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K10874 | RDM1, RAD52B; RAD52 motif-containing protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32959 | lncRNA | upstream | 192444 | 21734138 ~ 21734422 (+) | True | G22201 |
| TU32956 | lncRNA | upstream | 290296 | 21636123 ~ 21636570 (+) | True | G22198 |
| TU32955 | lncRNA | upstream | 290787 | 21635744 ~ 21636079 (+) | True | G22197 |
| TU32816 | lncRNA | upstream | 433368 | 21345129 ~ 21493498 (+) | True | G22094 |
| TU33101 | lncRNA | downstream | 47978 | 21977618 ~ 21979015 (+) | False | wnk4b |
| XR_006250495.1 | lncRNA | downstream | 106242 | 22035882 ~ 22089931 (+) | True | LOC122341843 |
| TU33104 | lncRNA | downstream | 106277 | 22035917 ~ 22089931 (+) | False | LOC122341843 |
| TU33106 | lncRNA | downstream | 106277 | 22035917 ~ 22064100 (+) | False | LOC122341843 |
| TU33114 | lncRNA | downstream | 339537 | 22269177 ~ 22287045 (+) | False | hdac5 |
| XM_043234701.1 | mRNA | upstream | 754 | 21924489 ~ 21926112 (+) | True | gh1 |
| XM_043234630.1 | mRNA | upstream | 8161 | 21899306 ~ 21918705 (+) | True | scn4ab |
| XM_043234631.1 | mRNA | upstream | 8161 | 21899306 ~ 21918705 (+) | False | scn4ab |
| XM_043235273.1 | mRNA | upstream | 83994 | 21797240 ~ 21842872 (+) | False | kansl1b |
| XM_043234702.1 | mRNA | downstream | 3604 | 21933244 ~ 21934233 (+) | True | ifnphi3 |
| XM_043234000.1 | mRNA | downstream | 21667 | 21951307 ~ 21974701 (+) | False | arhgap27l |
| XM_043233999.1 | mRNA | downstream | 21668 | 21951308 ~ 21974701 (+) | True | arhgap27l |
| XM_043234001.1 | mRNA | downstream | 21669 | 21951309 ~ 21974701 (+) | False | arhgap27l |
| XM_043234002.1 | mRNA | downstream | 34890 | 21964530 ~ 21974701 (+) | False | arhgap27l |
| XR_006248723.1 | other | upstream | 192739 | 21637743 ~ 21734127 (+) | False | crhr1 |
| TU32806 | other | upstream | 512580 | 21295702 ~ 21414286 (+) | True | G22087 |
| unassigned_transcript_291 | other | upstream | 1612535 | 20314260 ~ 20314331 (+) | True | trnac-gca_3 |
| TU32181 | other | upstream | 1738783 | 20187528 ~ 20188083 (+) | False | eftud2 |
| TU32173 | other | upstream | 1739668 | 20185567 ~ 20187198 (+) | False | eftud2 |
| TU33098 | other | downstream | 45612 | 21975252 ~ 21976665 (+) | True | G22301 |
| XR_006248300.1 | other | downstream | 46869 | 21976509 ~ 22025911 (+) | False | wnk4b |
| TU33161 | other | downstream | 599349 | 22528989 ~ 22530060 (+) | True | G22344 |
| TU33136 | other | downstream | 616518 | 22546158 ~ 22547208 (+) | True | G22329 |
| TU33451 | other | downstream | 975737 | 22905377 ~ 22906695 (+) | False | LOC122341356 |
