RNA id: XM_043230858.1


Basic Information

Item Value
RNA id XM_043230858.1
length 5135
RNA type mRNA
GC content 0.45
exon number 4
gene id si:ch211-256m1.8
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 23674032 ~ 23681012 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGCTCACTAGCACTCACTGCACTGACAAGTCGACATATACTTTGGGAGTCTTAAGGATGGCCCTACCTGATTATCCTATTCCAGAACTGGAAGTTACTCTCCAGGAGGCTAGCCGCGTGCTTCAGCTCACCTTAAATCCTGACCAATACCAACGTTATAAAACTGCCCTTCTTCAGCAGAAAGATGCACTCCAGGAAGTCCAAGAACAGCTGAAGAAACACGTCTCTGGACATGAGAACTGGGTGACTGGGGAATTCAAAAATCGGCTACTCTCTTGCTATGATCCTCTGCCCAATTCCACTGCTGTTCCTTCTGTCCTGCCCTCCTCTAAGCTGAAGGGGGAGTGTGCACAGATAGAGCGAGCTGCAGCCCTGCTTTGGGCAGCTGCTAAGCTGTACAGTGAACCATGGCTGGTGGAAGGGGATATGCCAACTGAGCGAACCCAACAATCGCAGGTTTTTGCGGCTAGTCGCCTACCAGGCAAGAGCCAGGATGAGCTAAAGACATACCAGGACAGTCTTCATGCCATATTGACTTGTCAAGGGGGTATATTTCCAATTCAAATTTTATGGCATCCAAGTTCAGGAGAATCTCTTTCTCCTTTACCTCTCAATGACATCTATGCCCAACTGGTGCATGCAATGAGTCACCCAGCAGCAGCCTCCGAACAAGATCCATCCACTATTTGTGGTCTGTCTTCTCTTCATCGCCAAGCCTGGTATTCTGTGAGAATGGAAATCTTAAATGCAGGGGGGGAAGCAGCAGTTTCTCTTCAAATGATGGAGAGTGCCATTCTGGCTGTTTCCCTTGAAGACAACCCAGCACCGGCCGATCTTGCAAATATGCTCAATGCTGTCCGGCTAGCAGAAAAAGGTGGCAGATGTTTGAGATACTATGATAAGGTGCTGAACTTGGTGGTTTTTAAAGATGGCCAAGCAGGCCTTTTGTTCGAGCATAGTGCCCTGGATGGAATGGTAGCTGGACTTGTTGTTGAACGTCTGTGGCAGCTCTCAGAAtcagaaaacagagaaaaaataaacactcaaaccaATGGTTTAGCTCCATCCTCAAACAGTGGTTCCCTTCATCCTAAACCTTTGAAAATGCCACTGAATGGCATAACTTTGCCGAATCAGTCTCTTTCTAGCCTTCAACAAGACAGCCAGTCTGTCGTGACGTTTGAAGTTTCATCTTACCCAGATATCTTCACCATCTTAAGGGGCCACAGAGGTTTATTTGATGCATGGATTAATTTCACTTTGCAGCTATCCTTGAGGCAAACACTTGGGGATACAGCTACAAGCCTTATCATGGTGACACCCACTCACATGCGTCACTTCAAACATGGCCGCTGTGATCCCACATACTCCACATCTGTGAGATCTCAACAGCTCGTTACAGCTCTGGCATCTTGCATTGGCCCAGACAAGGTTCCCCGGTACACAAATGAGCTTTTCCAACTCTTTCACCTTGCCTTTTTAGAGCACAAAAACCTCATTAAAGCCACAAAACTTGGCCTAGGTGTAGGGCCTCATCTGGCAGCCTTGCGCAAATCTATGTCTCAAGATAACCCATTAAAAAACTTTCTTGTCCCTTTTGGATGCCCCTCAATTTACTTGACTGGATCAGATCTGATGGAGGGAGTTGAGTGTGCTGTAGGTAATGTCTATGCTACAAACCAACTAGCAGTCACATATCTAGGCAGGAAGGACAAAGTACGTGTAGTACTGAATGGGAAGGGTAGTTTCGCAATCATCCTGGGAAATCTCAAAGAAAGGCTTGAGCTCAATCTAAAATTAGTAATGCTTCTGGCACTAAGGTATGCCATTGCTGGGCAGATGGGAGCTATTGAATGTCTCCTGCAAGACAATGAAGAAAAACTTGTAAATGGGTTTTCAGTGGATGATGCAATTGAAGCTGTAGAGCAGAAAGGACACAACAAAACCATGAAGCCAGATTTCTCTTTAGTAATTCATGGCGGGGCAGGAGAAGAAATGATGCTGAATGAAAAGGTGATTGGTACCATCGAATTTGCCCTTCAAACAGCTCTAACTCTTGGAGCACAAGTGCTTTTTCAGGGAGGTAGTAGTCTGGATGCAGTACAAAGAAGTGTAGCTGCATTGGAGGACTGTTTCTTGTTTAATGCAGGCAAGGGATCAGTATATAACAGAGATGGGAGGCACGAAATGGAAGCCACCATTGTCGATGGACATGGAAAGAACTCTGGATCCGTGGCATGCCTGCAAAGAGTGAAAAACCCAATAAAAGCAGCACGATGTGTTATGGAAAAGAGTGTGCACTCATTACTGATTGGAGAAGGTGCAGAAGAGTTTCTAGACAGTcttagagagaaagaaacaacaATGAAATCAGAGTACTTTGACACTGATATACGATACAAGGAGTTACTTATAAAGTCAGGTGATGGGAAGAATAACCATCCTCAAACCGTAGGTGCAGTTGCACTTGATAAGTGGGGCAAGTTAGCAGCCGCCACATCAACCGGAGGTTTAGTTGGCAAGTGGAAAGGAAGAGTTGGTGACACTGCTGTAGTGGGGGCAGGGATATATGCTGATGAGAAACTTGCCGTGACATGCTCTGGTGATGGTGATGCTTTCTTACGCCGATCAGTTGCTCACAAAGTAGCCAGCTTATACAACCTCAAAGGGTACAGTCTTAGACAGGCTTGTCGGGAAGTTATCTATGATGATCTGCAGGGAAAGTGTGCAGGAATTATTGCTGTAGACCATCAAGGGGAGGCAGTTATTGAAACCAACGCTGGGGTCATGTTTGTTGGTTCAATGGTCAACGGCATTCCTCGAACTGAAGTTTTGAGACCTATGAAGGAGTCTCAAAATGTGATTTGGGAGACTGATGAATTGGTAGCTTACCTACAGTCTAATCCTTTGACCCCAGGAGCAACTATTCTCACTCGAAAAACCATTAATGGACCTAGAAGCATCTTTCAGTTAGTCTTATCTGACTATGTAGCAATGATGCAGGGGGCACGGACTGTAGCCAGTCTACTTTGCGAGAAACTTGGTGTTCATCGCTGTGCCCTTGTGTCCATGCCAGAATTTGACAAGTCAGCTTACATCAAAATCTTACCTCTCCATGGCCTAGAACCAAATTGGAAGCCTCAGCTTGCTGAGGAAGTGGAGTTCAGTCCTTATGACCCTGGATACTGTAGCTCCAAAAGTGGTCCACGATGTGAAGATATACATCTTGATCAGGTGCAGGCAAAGATTCTCTCTAGACTCCCTACACCCAATGCACCTTCTTGCTTTGACTTCCATGGGGATCCATCTGATGGTGGCCTTTTCCCCCGCATTATCCGTGGTGAAGAGCAACAGTGGCGTGTCTGGGAAGACAAAGAACATGTAGCCTTCCTGACTCCTTTTCCAAATACACCAGGCTTTACAGTTCTAGTGCCTAGAAAACCTCTTAGCAGTGACATCTTTCGACTGAATGAGAGTGACTATACAGCCCTAACTGTGGCCACACGAAAGGTTGCACACCTTTTGCTAGAAGGAATGAATGCCCATGGTGTAGCTCTCATATTTGAAGGCTTTGAAATTGATTATGCCCATGCTAAACTGATCCCATTAGTTCCTCAGCCTAATGCCCTTAAACCCTCATCTGTGGCATCTCAGTTCTGCCCAACTTATGCAGGATATGTAACATCAGCAGATGGCCCCCCAGCTAGCAAAGAGGACCTAACAGACATCCACACCAAGATCACAAAGACTACTCCCCCTCAGTCCTGGAAAGATCCCCAGACTCACGCTACATTAGCCATTACAAGCAAATGGTATCGGGATCTCTTTCAAATACAGAACACCCTGTTTCATAGCACAGTAGAGTACTTCAACAACAAATGCAAGTATGCTTATGCACTGACCCCTATCACAACTGACACAATATCCTCTCCAATGGGTCTGGGGTCCGATTCTGAGCCAGTGTTTGTCAACATGCTGGGCCAAGATGTATACCTGGCAGACTCCATGCAGTTTGTTTTAGAGTACTTTATGAGGTTTCGCGATGGTCTTCCAGGGGCTTACTACGTGTCTCCCAGTTTCAGAGGGGAAGATCCTGATGCAACACATCTCAATCAATTCTACCATGTGGAATGTGAGCTCCTGGGTGACATGAACGCTGCCATTAGTATTGCTGAAGGATATGTTGCCCATTTGACTCAGGCAATGCTAAAGCAACATTCCAGCATTATCTTAAACATAGCTGGCACTCTATCTCATGCCCAAGAACTACTGAAGAGCTTAGAAAAACCCCTTCCAAGAGTAACTTTGGATCAGGCCATTCACATTATGCCTTCCTCTGATTGCCTTGAATGGGTTCAGGAGGGACAACCCCAGTTTGGCAGGAAGCTAACTCGAAAGGGAGAAAGAGTTCTAATTAAAAAGTATGGAGGTGCTGTTTGGCTTACAGAAATGGACCATCTTGGCGTGCCCTTCTACCAAGCATATGTTGAAGGCTCTGGCAGGAGCAAAGCCAAGGCGGCTGACCTTCTCTTGGGGTTAGGGGAAACAGTAGGGCTCGGGGAGCGTCATTCTACCCCTGAAATGGTACGAGAGGCCTTGCAGCACCATGCTGTACCAGAGGAATCGTACAAATGGTACATCAACATTCGCCAAGTCACCCCTCTTCTTACAAGTGGATGGGGTATGGGCACAGAGAGATACCTATGCTGGCTTCTGCAGCACAATGATGTCAGGGATATGCAAATCATACCCAGACTAAAAGCCAAAAAGTTCATGCCTTAAATGGTGTATCCTCAGAAGTTATATTTTGTGCAAGAATGTTCTGCAAACACAGCATAATCagtaattatatttacagttttaggGTGATGGCTTGATATATAAAGCATAGAATAAATGGCAAATACTCTCAAGCATTATAGCAAAAATAAGGATATGGAATTTTATGTTTTGGGGCTGGGCTGGGTTTTGATTTATACGAAACgctatcatttttaaaatctttttatcttttctaCTTTCCTTGTTTTGTTTAacactttttcttaaaatatcagaTGAATGCATTACTGAATGACttactgattcattaaaaaagtataacaaAATTTTgtataacattatttcaaagtacaa

Function

GO: NA

KEGG:

id description
K13051 ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33837 lncRNA upstream 1042 23667905 ~ 23672990 (+) True G22800
TU33792 lncRNA upstream 27866 23578476 ~ 23646166 (+) False G22758
TU33791 lncRNA upstream 52378 23578476 ~ 23621654 (+) True G22758
TU33788 lncRNA upstream 95791 23574898 ~ 23578241 (+) True G22757
TU33784 lncRNA upstream 110786 23563040 ~ 23563246 (+) True G22754
TU33845 lncRNA downstream 34214 23715226 ~ 23721719 (+) False c1qtnf6a
TU33840 lncRNA downstream 73510 23754522 ~ 23755997 (+) True G22802
TU33856 lncRNA downstream 77731 23758743 ~ 23759342 (+) True G22816
TU33879 lncRNA downstream 121164 23802176 ~ 23805489 (+) True G22833
TU33911 lncRNA downstream 189783 23870795 ~ 23871177 (+) True G22857
XM_043230902.1 mRNA upstream 12687 23655511 ~ 23661345 (+) True napsa
XM_043235549.1 mRNA upstream 29492 23636361 ~ 23644540 (+) True st13
XM_043235508.1 mRNA upstream 86404 23582431 ~ 23587628 (+) True cbx7a
XM_043235087.1 mRNA upstream 193741 23444986 ~ 23480291 (+) True mrtfaa
XM_043235613.1 mRNA upstream 229958 23438398 ~ 23444074 (+) True slc25a17
XM_043235475.1 mRNA downstream 1473 23682485 ~ 23684711 (+) True mpst
XM_043235476.1 mRNA downstream 3841 23684853 ~ 23687289 (+) True LOC122341829
XM_043235515.1 mRNA downstream 15181 23696193 ~ 23705438 (+) False il2rb
XM_043235509.1 mRNA downstream 15184 23696196 ~ 23705438 (+) True il2rb
XM_043235511.1 mRNA downstream 15184 23696196 ~ 23705438 (+) False il2rb
XR_006250499.1 other upstream 265218 23403441 ~ 23408814 (+) True LOC122341907
TU33550 other upstream 510316 23158249 ~ 23163716 (+) False prr15la
TU33451 other upstream 767337 22905377 ~ 22906695 (+) False LOC122341356
TU33136 other upstream 1126824 22546158 ~ 22547208 (+) True G22329
TU33161 other upstream 1143972 22528989 ~ 22530060 (+) True G22344
unassigned_transcript_294 other downstream 155087 23836099 ~ 23836180 (+) True trnas-aga_1
TU34051 other downstream 369227 24050239 ~ 24051863 (+) False LOC122342055
TU34052 other downstream 369726 24050738 ~ 24051863 (+) False LOC122342055
TU34076 other downstream 414012 24095024 ~ 24097159 (+) True G22958
TU34141 other downstream 753043 24434055 ~ 24439463 (+) True G22996

Expression Profile