RNA id: XM_043232021.1


Basic Information

Item Value
RNA id XM_043232021.1
length 7838
RNA type mRNA
GC content 0.49
exon number 18
gene id arhgap23a
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15180602 ~ 15243122 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gggaGTTCAAGAGCATTGGGTTGGGTAGGGCTCACcatagacagaaagagaaaaagagatacAGGGAATAACAGAGGGACGTGACAATGAGACATGAACTTGAAAAAGCACAAATCAGGAAATAAGAGgcATATTCCCATGATGCCTACCTAAGAGGGAACAATCCATATACAGGAAAGGCCCAGAATCTTCCTCCACCACCACCTGTCCTCTACCCTCCACGTTCAAAAACCCAGCCTCCTGAGGGGTACCCCTCCAGCCCTGCTCCAGCTTCTTCCCACATGGGGCAAAACCAGCTGGACAACTGGAGCCGCTGGCCCGGCTCCTCGTCTGGTCCCTCGCCACCCCTTGACAACCGGACAGTAGCTTCCAATGCTGTCTGGGCAGCCGAGGGCAGGAGCTGTGAGCCAGGAGGTGTTGGACACAGTAGCCCTGCACACCGAACCGAGGAGATCCAGTATGGAATGACTGACAAGGGACAGCAGGCAACTGGACAAATGAGAGGACGCTCAtattcctcatcctcctcctcaggAGGGATGTTGAGTCCCATGCATCAAGCTCATCTCGCCAACCACAACATAGGGCACATTGGAGGCCGCAAGGAAAGCCCACCTTGGGCCAGCCCTTCTCAGTCAACATCAACACCCCCATCTAGTCGCAACGAACGGACCCAACAAGCCCTTTCCAACTGGTACTACAGCCAGGTACCAGGCCGGGAGCGGGAACGGGAACGGGAGAGATCAAATTCTCGCTCCATGCACCCACGCCACAGGAGTTTCTCACAGGACCGTCTAGGTGAGCTTGGAAGGGCCAGGCGTTCACAGCAAACAGGTTTTCCCCACAGTGCATCACAAGACACATTGCTGCTCCTTCAGCAAAGCTCGGCAGCATACGCTGATCCATACTGGAACCATGGAGACTGGCGAGGTGAGCAGGCATATGGACAGCATCCATCTGCAGTGGCCTATGGGCGCAAGTCCTCTGAAAACCTTCTCGCAAGCCGGTACGGACATTCGGGACGTTCACTAGAAACTCTCGACAGAGCCGTGGGGATACTCTCACCACAACTCGAAAGATCCACTTGGGTCCAGCAGCCTCCAAATCGGACTGAAAGCTATCTGAGACGTGGAGGACATTGTGAGTCACACCACCAAATCCAGcagcaccaccaccaccaccaccaccaacaCACACCTCAGCATCCAAACCTCACGCACGCTGTGCACCAACACTCGTCTCAGACTTCGCAACCACAGCAGGCAGCTCCACAGGCAAGACGTTTGCCTTCTTGCCAGAGTCTAGACGAGGAACCAATTGGCTATCGTAGCTACAGTCCCTCTTTCAACCGGAAGACCGGCCGCATCTTGCAGCAAGCCCAGTCTTTTAGAGACCCCTCTTACGCAGGTCCACACCTCTGGACCCCTACGCCCAAAACCAGTCCTCCAGAGGGCCACCCATCCTCAACCTCTTCTTCCCCAGCTCCGCCAACCACCTCCTCTGCAACTCCCCTTGAAGGACAAGACAGAACCTACCGACCGACTAATCACGACAGAGGGGCAGGGGAAGCAACAGGTGAAGCCCAGACACAGGAAGTGGTTCTGAGGCAGAAACCACCCACTGGCCGAAGGGGTGCGAATGCCCTGCGACATCCACATTATGGCATAGCGCTTGACTCCAGTGACCCTCTGCTCTTTACCTCTGATCCTACGGAGCCCCCTGCCAAAGCGGAGAGTGCTATTTCCCATCGGCGTACAAACGGTAACCTGCCACCCCTATCCATAGAGGATGATTCCCTCGCGTCAATTCCCTTCATAGATGAGCCGACCAGTCCAAGTGCAGATCTGCGGGCACGTCATGTCCCCGCCTCCTCCGTCGTGTCCAGTGGCGGTATAAACTCCGCCCCTGCTGTGGCCACAAGCCCCGCCTCCCCAACCTTCACCTTTCCCCTCAACCGTCTTTTCTCCCAAGACTGCACAGGTGATCCCAAGTCTAATCGTCGCTCTTCTTACCTGCTGGCCATCACCACTGAGCGCTCCAAGTCATGTGATGAGGGGCTTAATGCATATAGAGAAGAGGGGCGGGTCTTCTCGAGGATTCCAAAAAGAGTTAAGAGCTTCTTTACTGAAGGGTCTCTGGACAGTCTGGGTGCTGCAGAAGAGGCTCGCTCTAAACGACACTCTACCTCGGAGCTGGGCAGCATCAGCTACAGTGACGTGAAGAGAGAAGGTTGGCTCCACTTTAAACAGATCCACACGGAGAAGGGCAAGAAGGTGGGTAGTGCCATCTGGCCTTGGAGGCGGGTGTTCTCCATGCTTCGGTCCCATTCTCTGTTCCTCTACAAAGACAAGCGAGAGGCAGTGTTGAAGGCGGCGCTAGGAAACGGGGCTGAAGACgagcagccaatcagcatcCGGGGCTGCCTTGTGGACATTGCGTACAGCGAAACGAAGCGGAAACACGCTCTGAGGTTGACCACACAGGACTTCTGTGAATACCTGCTACAGGCGGAGGACAGAGAGGACATGCTGGAGTGGATCAGGGTCATCAGAGAAAATAGCAAGACCGACAACGAGGAATTGGGATTCTCACGGCAAGCTCTCATCAATAAAAAACTTAATGACTACAGGAAGCAAAGTCCAACGGGTAGTAAACCAGACTCCTCACCCAGAGTGCCTCGAATGACATTTCTGCTCAGTAAGCAAGACAACAGCGCACCTCCACGCTCCCCAAAACACGAGGCCAAAGACGAAAGCAGCCCCCCTAAATCTCCATGGGGCATAAATATAATGAAGAAGGCTAAAAAAGCAAGTCCTAAAGCGTTTGGTGTGCGTCTAGAGGACTGCCAGCCTGCTACAAACAACAAGTTCATTCCCCAGattgtggagatctgctgcggGTTGGTGGAGGACATGGGTCTGGAGTATACAGGGATCTACAGAGTGCCAGGAAACAATGCGGTAGTGTCCAGTCTGCAGGAGCAGCTCAACAAAGGAGGAGACATCAACATCGCTGAGGAGAAATGGCAAGACCTGAATGTGGTCAGTAGCCTGCTAAAGTCTTTCTTCCGTAAACTCCCAGAACCCCTCTTCACAGATGACAAATACAATGACTTTATTGAGGCCAATCGGATGGAGAATGCCAGCGATAGGCTGAAGACAATGAAGAAACTGATACGTGATTTGCCAGATCATTACTTCCACACTCTAAAATTTCTAATTGGACACCTAAAAACTGTGGCAGACAGCTCTGAAAAGaacaaaATGGAGCCGCGTAATTTGGCGCTGGTGTTTGGCCCCACTCTTGTCCGGACCTCAGAGGATAACATGACAGACATGGTCACCCACATGCCTGACCGATACAAGATAGTGGAGACACTCATTCAGCATCATGCCTGGTTTTTCAGTGAAGAACACGAAAAAGATGAAAAGACACCAGTGGACACAGAAGATGTTCAGCCTGCCCCAAACATAGATCACCTCCTCTCTAATATTGGCCGGACGGGCCTGCTTGGGGAGGCATCAGACTCAACCAACAGTGATTCAGCAAAATCTAAGGGGTCGTGGGGAGCCAAACGTGACTTTACTGCCAAGGATATCCTGACGTTATCGATTATGTCGGCTGTGACACGCAAACGGCGGAAGCGGCCTAATGGCCGTCTCCTCGGAAGCAGCACAGACGATGACTCCGAGCATGAACCCGTTAAATCCTGCATCTCCGAAAAAGACGACCTGCAAGAGATGGGGAAGGTCGCATCCTTCTGCGCCCCCAGAGCAGAGGgagaagaagatgatgaagaagaagaagaggaggaggaagacgaggaagaggaggaggagtgtGAGAGACAGAAGGCACGGGAGCAGAAGGAAGAAGTAGTTCCCAGCATTTCCTCCACAGAGGAAGCGGCCCCGGCGGTGCTGCTGAGCGAGGAGGAAGAGCAAAGGTCTGAAGTGAAAGGTCGCAGCTGGCGAGGAGATGATGCACGGTCTATTGTGTCAGGCTACTCGACTCTCTCCACTCTGGGGCGGAGCTTAGCATCAGAGGGGCGGGGTGAAGATGCAGACGACGAGCATAGCGAACTGGTGAGTGAAACCGATAACGAAAGCGGATTCGCTTCACGCTCCCTCACCCAGGAGAGGCCGGAGAAACCAAGCCGGAACTCGCACGCCTCACCCGAACCGACCGCCCCGCGCAGTTTCCTCTACGCGCACTGCAAATCGCAGCCAGCCTCAGGCTCCACCCTCGCTCCGCCTCCTCCTTCCCTCACAACCAGTCCCGAAGACAGCGCAGCCCGTTCATCTACTCCCTCCACCTCCTCTTACTCATCTACCGCCTCCCAGCGCCACCACAACCGCCACTCTTTTAACTCCCATCGCCTCATTCAGTGCGACACCCTTGCGCGGCGCCGGCTCAAAGCTGACAAAGCCAAAGCGCCCTCTGTGGACCTTTCCGAACTGTCCAGCTCCTCCACTACAGAGGGAGAACGGCTGTCGGGTGCGAATCAAATCCCTGATTCCTCTTCGCCCCCTTCCCCCAAAACCAGATCCTCTTCTAAAGGGGTTAACGTGCGCAAAGAGTACACGCCAACATCCGCAGCCGGTCTAGGAAATAAAAGCTGCTCGTTGTCCACCGGGCAGGGTTCCCTGGCGGATCAGGTCCGGGCTCGTCTAATGGGCTCAGCGGATGATCTCCGCAGTGTGGGCCTGAGGAAGCAGCTCTCCCCGGAGACGCGTCGAAAGAGACGGGCTTGGAGGAGGCACACCGTGGTGGTCTCCCCTACGGACTGTTCAGACAAAAAAGCTCCGGCGCCGCCCCCCAAACCGCTAGCTTCACCTTCCCCTATTGAAAAGCAGGACGTTGGAGAGTCCCACCTAGTGTGCTCAGAGACTGAAGCCCCTACTGCACGTCGGGCCCCGCCTACCTCGCGCTTTCGTGATTTCTTGTAGCAGTGATGGTGTGTACAGGCTAGTGAACCAAGAGAGCTGGATTTGGGTTGTGTCCTCAGTCCGTTTACGCTGCTCACACTGACAGTGATTACATGGTTGCCAGGTACCGTTGACCGTTGGGCGTTCATACTCACTATAGTCGAAGACTACAGAATAACCAAGACGTGTAGCTTGTGTAGTTCTGAATGGGGAAAAATGGAATGCGCAATATGGAACAAATCGATCGAAGCCCCACCTTCTGAGTAAAAGAGCCAATCGCGAGTCGGTAAAGTGAGCGTGTCATTGCAGCTGCCGTTAGAAGTcccggttgctatagaaactgTGCGCACACTGGCTGGTCTAGCTtgataaataagctttttaaacCACATATACGATACTGTCGGATTGCTGTCGGTTTTAACTGGcgaattcaaatataaaattcaatCGTAAGCTTGGCCAACAGTTTtggagaatttgatgtttccccTTTTAAAGATATAGGAGCTGCGGCTGCATGCCTGAGAGGCGTTTTTAAAGACGGCCTCCGAGCAATATGACTTTGCTGGAGTGTCTGGTAGCACCATTGTGCACCATTCAGAATTGTATTGAGAATGATTTTAAATTCTAGTTCACTTTTGGAATTtgaacagaatttaaaataaggCAGCAAATTTTAAAATTGAGTAAGTGGAATTAAgatgagctgaaaaaaaaatgaaaaaagggcATTTTCATACCTGTAGACTGTTTGCTTTGTTCAGGAGCAGGGATTTGAATTGTTACAGTTGCCCCTTTCGCACAGACTTTACTGGTAAATTACAGGGAGATTACTTTTAAAAACCGCGTCATTTCAAAAACGACAGCTTCTCATACCGGTAAATTGATGGAAGAATTTACCGGTATGAGAAGTTGTAACGTTACCAGTAAACAGCCACAATGATGCTGTGTGTGAACGCAGAGTAAAGATTACGGGTATGAGCGTGTTTGAGTTCAGAACACGGTGGTGTGAGACGTCTAGTCTAATGAACAAATTAAGAGGTCACTTGGTCAATGTCTCAGAGTTTACTGGTAACTTAACATGAAATGTGCTTCACTTTCAGATGGAACATCACTGTCTGTGTAAACagcacatttttgtatttaccGGTAAAGTCGTTCAGCTAATTTTACTGAAATAGACTTGTATTACTGTGTGAAAGGGGTTAATGTTGACTCTCTCATTGATTCGGTTTGCCGTCACATGTGCATAAAACTATCCCTTCACTGGTCAGAGTCAACTTGTTCCTGTTCAATTGAATTGTTACACACACtcatatgtataaatgtatacgtATATCAATGCTTCACTGGGACAGCATTGTTGCAATACACCTGTTTCAGAGAAGagcaataacaatttaaaatgaagagaTATTTGTCACCTACTGAATTAACACGTTTCACTTTACGAATTGTGTTAGAGCTTGGGTTGTTGGAATATAAGGCCAGATTTCATTCTCAGACTGATTGTTTCGGCAATAGTGTCAGCTTCTGAAACAAATGATCCAAGCAGGTCAGGTGTGAAAATGCCCTCAATGACGTTTGTAAAGAGAAATGAAAGCGTTATCAAGACGCGAAAATCTGCCTCACTTGATGCCACCTTTTAAACCGagtacttttctttttttcattttactgacAAAGGTGGAAACGCCTAATTTCCCAAAACATTACCTGTTGAAATTTTCTTGAATCGTACGTTCTACGTAAGCCTGATTTCCGTTAGTGCGTGGCcaaatttgaatgcattaaatttctTTCAACTGAAAGGAAAATTTCACCTAGCCCTGGTCCGTATCCCTTTTATTGCTTCATCACATTGCTGTTCATTTGCATAAACACGATCTCTCTCCTTTATGCAGCTGAGCGACCAATGTTGTTTCTGCTTATGTTGCCTCGAATCATTTTCAGTGAAAATGACTCCAATCACTCTGTCGCTGCGAATCGCTGTCGGTGTGATCAGCCCTTTAGGTTGGCGTGTGAATACAAAATAGAGAACCGTTTAAAGCCTTCGGTTAAAtcgcatttacatttacttctACTCAGATCTCTTCACCTGCAGGGCAAAGGGGCTTTTCGGTGTTGCCAAAGTTACTGCCAAGACCCTCACGACTCACATGCCACGgagtgctttttttgttttcatgtcccAGATGAACCAATTCTTCAAATGTGCCGGTGCAGTATTGGTTAAACAGTGTTATCAAACAGGAACAGTGTTGATAGTGACAGTTTTACTAGATTTAACATAGGCCATCGAGCTTAGAGCAGGTGCGTAATTCTACCAGTAACTCACTACATTAAGATCCAAAAGAGGCAGTGTGGTGTGTTCACCTTCCCACGTTCATCTACTTTGAGTAACGGCTCGTTGGTGAAATCACTTCatatgagtgtgtatgtgtgtctgatATTGCTTGTGTATACATTATGTGGTCGAGTATGTGTGTCAAactattttgtaacatttgtaCAAAGCCTTGCTTAAGTTAACcttgtaaataaacatatattatctttttttttttttttattttagtttatatatggTTTACAAAGTGCACTTAGGTGCACGGTCATTTCTTTCAAGATGTTacttgaaatgtttttccttaatattttttgtttgtttgttttatacacagtatatattatacatatattttgtatgaatATAATAAGTACTTTTATTTGGAAATCTTGGGGTGTACCTGTTTTAACTCCACTAGACTGTTTTCCCTGTTAATGGCCTTTCTCTGTGACTTACAAATACTATGCAGAATCTATTCACCTCAATGCAAAGAACAGAGATCTAACCTGCAAAGAGTGTCTGTCACAAGCTATAATAAATTCTTATTGCAGAGCATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU30157 lncRNA downstream 190611 14988277 ~ 14989991 (-) True G20253
TU30158 lncRNA downstream 190611 14988277 ~ 14989991 (-) False G20253
TU30150 lncRNA downstream 221315 14956739 ~ 14959287 (-) True G20248
TU30146 lncRNA downstream 328740 14849717 ~ 14851862 (-) True G20245
TU30107 lncRNA downstream 509033 14669588 ~ 14671569 (-) True G20225
TU30330 lncRNA upstream 51443 15252095 ~ 15254617 (-) True G20344
TU30323 lncRNA upstream 79695 15280347 ~ 15333486 (-) True G20338
TU30340 lncRNA upstream 119058 15319710 ~ 15324611 (-) True G20352
TU30352 lncRNA upstream 165484 15366136 ~ 15366451 (-) True G20363
TU30588 lncRNA upstream 434420 15635072 ~ 15637612 (-) True G20546
XM_043233692.1 mRNA downstream 1243 15158749 ~ 15179359 (-) True plcd3a
XM_043233693.1 mRNA downstream 22261 15149891 ~ 15158341 (-) True nmt1a
XM_043234674.1 mRNA downstream 32457 15146294 ~ 15148145 (-) True LOC122341310
XM_043235663.1 mRNA downstream 34994 15141817 ~ 15145608 (-) True LOC122341947
XM_043235662.1 mRNA downstream 39581 15138220 ~ 15141021 (-) True LOC122341946
XM_043235651.1 mRNA upstream 101596 15302248 ~ 15309607 (-) True fam83ga
XM_043235652.1 mRNA upstream 109093 15309745 ~ 15316561 (-) True grapa
XM_043230622.1 mRNA upstream 138310 15338962 ~ 15341877 (-) True b9d1
XM_043233980.1 mRNA upstream 261642 15462294 ~ 15491956 (-) False llgl1
XM_043233979.1 mRNA upstream 261642 15462294 ~ 15491956 (-) False llgl1
TU30272 other downstream 1374 15120806 ~ 15179228 (-) False plcd3a
TU30290 other downstream 35010 15142941 ~ 15145592 (-) False LOC122341947
TU30091 other downstream 741061 14435150 ~ 14439541 (-) False mlx
TU30582 other upstream 398126 15598778 ~ 15600286 (-) False atp5mf
TU30746 other upstream 1250488 16451140 ~ 16451800 (-) True G20680
TU30805 other upstream 1515108 16715760 ~ 16729665 (-) False mafk
TU30968 other upstream 1838538 17039190 ~ 17042336 (-) False snn
TU31152 other upstream 2462853 17663505 ~ 17691189 (-) True h3f3a

Expression Profile