Item | Value |
---|---|
RNA id | XM_043233706.1 |
length | 8728 |
RNA type | mRNA |
GC content | 0.52 |
exon number | 22 |
gene id | setd1a |
representative | True |
Item | Value |
---|---|
chromosome id | NC_056701.1 |
NCBI id | CM032070.1 |
chromosome length | 30200998 |
location | 12193978 ~ 12215690 (+) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
species | tiger barb (Puntius tetrazona) |
id | name | namespace |
---|---|---|
GO:0032259 | methylation | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0003676 | nucleic acid binding | molecular_function |
GO:0000166 | nucleotide binding | molecular_function |
GO:0018024 | histone-lysine N-methyltransferase activity | molecular_function |
id | description |
---|---|
K11422 | SETD1, SET1; [histone H3]-lysine4 N-trimethyltransferase SETD1 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU28710 | lncRNA | upstream | 59021 | 12132629 ~ 12134957 (+) | True | G19274 |
TU28698 | lncRNA | upstream | 75203 | 12118538 ~ 12118775 (+) | True | G19263 |
TU28697 | lncRNA | upstream | 76069 | 12117343 ~ 12117909 (+) | False | pax10 |
TU28687 | lncRNA | upstream | 119475 | 12074231 ~ 12074503 (+) | True | G19257 |
TU28685 | lncRNA | upstream | 120905 | 12072719 ~ 12073073 (+) | True | G19255 |
TU28736 | lncRNA | downstream | 12245 | 12227935 ~ 12228520 (+) | True | G19287 |
TU28700 | lncRNA | downstream | 30518 | 12246208 ~ 12249997 (+) | False | LOC122341822 |
TU28784 | lncRNA | downstream | 296236 | 12511926 ~ 12513721 (+) | True | G19326 |
TU28785 | lncRNA | downstream | 296236 | 12511926 ~ 12513721 (+) | False | G19326 |
TU29145 | lncRNA | downstream | 465568 | 12681258 ~ 12681565 (+) | True | G19579 |
XM_043235340.1 | mRNA | upstream | 1835 | 12183251 ~ 12192143 (+) | True | fus |
XM_043234668.1 | mRNA | upstream | 11480 | 12179223 ~ 12182498 (+) | True | si:dkey-16l2.17 |
XM_043234060.1 | mRNA | upstream | 16249 | 12174276 ~ 12177729 (+) | True | kat8 |
XM_043234043.1 | mRNA | upstream | 20104 | 12168881 ~ 12173874 (+) | True | rnf25 |
XM_043234932.1 | mRNA | downstream | 921 | 12216611 ~ 12230379 (+) | True | hsd3b7 |
XM_043235468.1 | mRNA | downstream | 16737 | 12232427 ~ 12247044 (+) | True | LOC122341822 |
XM_043235469.1 | mRNA | downstream | 38168 | 12253858 ~ 12259180 (+) | True | cd2bp2 |
XM_043235470.1 | mRNA | downstream | 40218 | 12255908 ~ 12259180 (+) | False | cd2bp2 |
XM_043235471.1 | mRNA | downstream | 40385 | 12256075 ~ 12259180 (+) | False | cd2bp2 |
TU28690 | other | upstream | 93126 | 12092603 ~ 12100852 (+) | True | LOC122342134 |
XR_006249731.1 | other | upstream | 360054 | 11773201 ~ 11833924 (+) | True | kcnc3a |
XR_006249728.1 | other | upstream | 360054 | 11773201 ~ 11833924 (+) | False | kcnc3a |
XR_006249729.1 | other | upstream | 360054 | 11773201 ~ 11833924 (+) | False | kcnc3a |
TU28236 | other | upstream | 824226 | 11368893 ~ 11369752 (+) | True | G18949 |
XR_006249244.1 | other | downstream | 87674 | 12303364 ~ 12312990 (+) | False | nbr1b |
TU28786 | other | downstream | 296236 | 12511926 ~ 12513721 (+) | False | G19326 |
TU28787 | other | downstream | 296236 | 12511926 ~ 12513721 (+) | False | G19326 |
XR_006250478.1 | other | downstream | 304147 | 12519837 ~ 12528803 (+) | False | gtpbp1 |
TU29192 | other | downstream | 619691 | 12835381 ~ 12987913 (+) | True | LOC122332158 |