RNA id: XM_043233826.1


Basic Information

Item Value
RNA id XM_043233826.1
length 2255
RNA type mRNA
GC content 0.41
exon number 7
gene id baxa
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14657730 ~ 14664833 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTGAGTTCAACCAGAATGTTAGTTAGAGGCCTGTTATCCgtgattatttaattacatttaaacaactgTACAATCTTTGTAACGACACGAGCGCGTCATGTGGCTGGTTGCCGTCTAATTTGAGTGTTTTAAGAAGtgTGCCGCATGAGAATCTTTAGCGACTTCCTTCCTGTCCAAAAATCGACGTCACGCAGCGGAAGAGTTTTCACTTATTTTCAGGCTAATATGGCAGCGCCGTCGGGTGGAGGCGATACGGGCATTGGCAATGACCAGATAATTTCCTTGGGAGCCGCTCTTCTCAATAACTTCGTCTACGAACGAGTTCGTCGCCATGGAGACAGTGAAGCTGAATTAACCCGGAGTCAGCTGGGTGGTGTTGAGCTGTGCGACCCCAGCCATAAACGCCTCGCGCAGTGTTTGCAGCAGATTGGAGATGAGCTGGATGGAAATGTGCAGCTGCAAAGTATGTTGAATGACTCCACTCTCCAACCCACCCAAGAAGTCTTCATGAAAGTGGCGCGGGAAATTTTCTCTGATGGGAAGTTCAACTGGGGCAGAGTGGTAGCGCTTTTCTACTTTGCGTGTCGGCTTGTTATCAAGGCTATTATAACCAGAATTCCTGACATCATCAGAACCATCATAAACTGGACTATGTCTTACATTCAGGAACACGTTATTAATTGGATCAGGGAACAGGGTGGATGGGAGGGAATCCGCTCCTATTTTGGAACCCCGACATGGCAGACTATCGGCGTTTTCCTGGCTGGGGTGCTCACCACAGTGCTGGTGATCCGCAAAATGTGAACAGACTGGCAGGAaggtggagagaaagagaagcgaGAGTTGAGACGATGAACAGAGGGTGAAACAGACCAGCAAAAGAGAACAGAAAGATGAGGGGGAAGAGGAAGGGATTTGGAGAAGAGATACAAAGAAAAAGACAGTTAAAGAGCGTTAAAAATGGCCTCAGCTAATCAAAAACAATGAGGgagggaggaggaagaggaaagagCGAGAGTCAAGAATGATGCAGATGTCTTGAGCCAGTCTTGTTGCTCCTGAGCTTGTGCTCTTTCAATTTTGACAACATTTGCACTGAAAATCAGAGATTAATGCGTAAGTTCAGGTTTAGGCTTTATTtgagctatttatttttaatttgggcTTATAGGTGTGTAGGTTATATACAGGACTGTAGTGGTATTTGATTTAATCTGTTGAAATGCTGAAATTTCACATTAAGTTAAgttctttttattatgttatttttagtttttcctcTACAGTCAAAACGACATATGATAAATAGATGCATTACCTTATAaatggaattattattattactattattaatatattattcttaGCATTAAGATAAAAGCATAATTGTATCTGTCCTTTTTTAGTGCACTGTCATTTGAAAGAGTGGGAATGGGCTCAGACTGTATTCTGCTGATATTTTAATTTCCTATCTCTTCCTCGTCCTCctcgtctttttttttcactgtctCTAGTTCTTCACGGTAGGGACTATGAAATAACTGTAAAGGTTATTGTACTTGAAGGTTGAGCCTCTTAAGAGTTCATGAAATGTTTGCAACAGCGTTTTGAGAAGTGCAGCCAACCAATCATCACTCTGGTTGTGGTGTGTGGGTGTGTCTTCGTCAGTAAGCCCCTCCCACGAAAGGGATGGATAAAACTAGTGACTCTTAAACACATTGAATTTCTCTGAGCCATGATGATCTCGTTTTTTGCAGAAccaaatattttccttttcaaattCCTTTTGGATTCGACAATCCAAAGACTTCAGATGCAGGTGCAGACTCTCTGACAAAAAAGCAGTTTGTTTGGCTTGAGCTGGTGCAAACATACGCTCTTGCAGGACTTACAGGCCGATTAGTTGAGCTTCTTTTCTCAGCAAGGTCTTCtcagtactgtatttttaagatggTTAGCCAGACCCACAATCCTACTTTTACATGCaattgttctttctttcttttttttaatatacttgtTTCTTTATCTTTTGGCTGTTTGGATACAGTTtcataatcttttatttttggttcTTTCGTTGACAGTGCCTTGGCCTTTTTATGATATTAGCCACcactttttcatctttttctacATCTTTGTAAACTGGTATAAAATTGTGCACCCTAAGGCAGTTTGTCTGCTGTGTGAGCCCATGAGTTTGTTTTGTAAGTcgtaaaattaaacaataaattgtttttatggATTTCAA

Function

GO:

id name namespace
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0001836 release of cytochrome c from mitochondria biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0046686 response to cadmium ion biological_process
GO:0051597 response to methylmercury biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0008053 mitochondrial fusion biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0015267 channel activity molecular_function
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K02159 BAX; apoptosis regulator BAX

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU30123 lncRNA downstream 249 14605029 ~ 14657481 (-) False G20230
TU30124 lncRNA downstream 249 14605615 ~ 14657481 (-) True G20230
TU30125 lncRNA downstream 53516 14603194 ~ 14604214 (-) True G20231
TU30083 lncRNA downstream 198176 14433705 ~ 14459554 (-) True G20212
TU30087 lncRNA downstream 199820 14447335 ~ 14457910 (-) False G20212
TU30109 lncRNA upstream 1081 14665914 ~ 14671569 (-) False G20225
TU30110 lncRNA upstream 1419 14666252 ~ 14671569 (-) False G20225
TU30107 lncRNA upstream 4755 14669588 ~ 14671569 (-) True G20225
TU30146 lncRNA upstream 184884 14849717 ~ 14851862 (-) True G20245
TU30150 lncRNA upstream 291906 14956739 ~ 14959287 (-) True G20248
XM_043234931.1 mRNA downstream 16602 14610261 ~ 14641128 (-) True gpatch8
XM_043234967.1 mRNA downstream 75967 14573762 ~ 14581763 (-) True arf2a
XM_043234753.1 mRNA downstream 133992 14465704 ~ 14523738 (-) False LOC122341419
XM_043235948.1 mRNA upstream 303092 14967925 ~ 14987140 (-) False mpp3a
XM_043235949.1 mRNA upstream 303092 14967925 ~ 14987140 (-) True mpp3a
XM_043235950.1 mRNA upstream 303092 14967925 ~ 14987138 (-) False mpp3a
XM_043234672.1 mRNA upstream 327210 14992043 ~ 15009115 (-) True si:ch211-198m17.1
XM_043235008.1 mRNA upstream 350112 15014945 ~ 15026960 (-) True znf281a
TU30091 other downstream 218189 14435150 ~ 14439541 (-) False mlx
TU30093 other downstream 218189 14436215 ~ 14439541 (-) True mlx
TU30094 other downstream 218189 14436215 ~ 14439541 (-) False mlx
TU30092 other downstream 220690 14436215 ~ 14437040 (-) False mlx
TU29676 other downstream 851752 13805368 ~ 13805978 (-) True G19933
TU30272 other upstream 455973 15120806 ~ 15179228 (-) False plcd3a
TU30290 other upstream 478108 15142941 ~ 15145592 (-) False LOC122341947
TU30582 other upstream 933945 15598778 ~ 15600286 (-) False atp5mf
TU30746 other upstream 1786307 16451140 ~ 16451800 (-) True G20680
TU30805 other upstream 2050927 16715760 ~ 16729665 (-) False mafk

Expression Profile