RNA id: XM_043234015.1


Basic Information

Item Value
RNA id XM_043234015.1
length 3043
RNA type mRNA
GC content 0.44
exon number 2
gene id gpr146
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 17658434 ~ 17668692 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGATTCGTAGTAAGATCATCAGCGTCCTCCCCTTTCCAGAACAAGCTTTGACGGACCAGAGACGAATATACCATATGCAACTGTGTTTACGCCGCATATCGGCGCCTTGATCGATCGCGTTTTTACTTACTTCATTTCACACGAGGTCCTGGTACTCTAGCTACCGATTTGGGAGCTTTTGTCAAAGTATCCGAGGAGAAATGTCAATGGAAATACAGCAGAACCCGATGCCTCCGTAGAGCTGTCTCAGTGCCAAGAACTGGTCCTCTGctgatTCAGAAAGAAGGATCAGACACCTTTGGAAATCTAGAAATGTGGAGCTGCATGGTTTACAATGAGACGGACGACAGCGTGGACCTCCGGCTCTGCCAGGACTTTGGACTCATTCTGTCCGTCTTCTCTCTGGTGTACCTCATCGTCTGCTTTCCAGTGGGGCTTTGCTACAATGCCCTGCTGGTGGTGGTCAACCTCTCCAACAAGGTCACCATGACTATGCCTGATGTCTACTTTGTGAACATAGCCATTGCTGGCCTGGTGCTAAACTTGGTGGCTCCAGTGGAGCTGCTGGGGCCCAGTTTTACACGCTGGCCAATGTGGGAGTACAACAATGAGCTCTACATTACCCTTCTCATTCTCTTCAACATCTCCTCTCTGGTCATCATGTACTCCACGACTTTGCTCAGTCTGGACTATTACATTGAGCGCGCTCTCCCGCGCACCTATATGTCCAGCGTTTACAACACCAAACATGTCTGCGGCTTCATCTGGGGCGGCGCCGTTCTCACCAGCTTCTCTTCTCTGCTCTTCTATGTATGCAACCACGTCTCCACCAAGATCATCGAGTGCTCCAAGATGCAGAACAAAGAGGCTGCTGATGCCATCATGATGTTCATCGGGTATGTGGTGCCAGCGGTGGCTGTGCTTTACGCATTCGTGCTGATCCTCCGCATCAGGAAGGAGTCCACCCCTTTGGACCAGGACTCTGGGAGGCTCGATCCATCCATCCACAGGTTGCTGCTGGCCTCTGTGTGCATGCAGTTTCTTTTATGGACTCCATACTACATGACCTTACTGGTGCACACAGTGGCGGGAGCTCCTGGGAGCCATTCTAACAAGCAGCACCTCACCACATACTTCTTCCTGAGATGTTTATCCGAGCTGCTCGCTTTCTGCAGCAGCTTCGCTATTCCCCTTATGTACAGGCAAATGAACAAGAACTTCTCCCATAAACTGCAGCGCCTTCTAAAGAGACTGCATTACGGGGACCAATCGTGTCCTCACGAACGCTCGACAGTACAGCAGGTGGTCACATGAGGGCATGTGTCCAGTCAGACCTGCTTCTCCCTTGCTGGCACTTACTCGAATCCACAGAAGTAGAGCCAGCACATAAACCTGGATATATATTGCGTGCTGAAAGGAAGTATTTTGCTCACCACAAGGAGTGGTATGTGTCTCTGTGAAATTGTGGAACCTCCGTAACACTTAACGACTTAACTTTATTTGTCCATCTATGTGGTGAATGGGCAACCAAGAAGAAACCACTAAGTGCTGTTTTTGTGTAAGCAATGTCTATTCTTTGGGTTCTTGGGCCTGGGGAAAATCTCAACCCATCTGATGGTCCTTTCGGTGGAGGGGGGAAATGTCTAACGTTTGTAATCTGTTACAGGATATGTGGCATAGCCTTCTAATGTGATGCTTTTAGACCAACCTATTCCCTTTTAGCTTAAGGCTACATTTCGCACCAGGCTTTCTGTGTTGTGATCCACAACAGCATAAGCTCTTCAGTCTGGATTGAGTTTTCTGGTCACACTTTCCATAAAAACCTCTCTGGTAGACGCTAGTAAACGCAATATAATTACCTCAATTTCACACACCAACGGGCATTACATTGGAACGGTCTAACCAACTTTTACAGCACTCAGAAATAACTCAATGCGACTGATATCAGGGAGCGGGaaagattgtgtgtgtggttgtgtgcTGGtggttgtgagtgtgtgttctcGAGTGCTTGCTGCTAAAGATATGTGCATCATAACTGCACAGCTGCTCAgccatattaaaatgtgtatagcTTATTAAGAGGAAGCTATAGAATGATCTACCGGACAATGGATCACGGTTTTAAGGTCAACTGGTTAGAGATTTAATCTTCATTCAATACCTTTTCAATCATTAGTCTGTTACTACTGTAATTGTTATCCATGCACCATGAGGTCGTGGGTAACAATTAATGTTTTGAGATGTGAATCTAGGTTGCACAAGTCCTTTTAATATGATCAAACATATTTGGTTTCACTTAACAGCCCTATGCAATAGATTATTTGGTAAAACTGCTCAAATTTATAAAGGACACAGTTGATTTCTGAAAGTATTGGGTCGGACTTCAGTGCTTCTAAGAGATGAATCTCATTGGGATAACGTTTCCTTTCTAATGTGCATATCCAAAAGAGATACGAGTTCTTATTGAGATTAgttgcatgattttattgtatgcatatatagagagatatgCATCAAAGCTCTCAGTCTGAGAGAAAATTATAGACATTTCCAGAAAGTAATACTCAGAGGCAGGATGAGAAATAGTACAGTTTAAGCTATTAAAATGGTTTGTTgttatcaaaaatgtctttactcTTGTTTTTCTCAAGTCAGTGGATGCAAAATTTGTATGTTTTGGAAAGAAAGCACTGTATGTAAATGGAGGAGTGAAAAGGTGTCATTTCAATCCACTTATGTATGCAAGGGAAAGAATGTATTTAAAGTCATGAAGGGGATTTAAAATCAGTTAACCCTCAATCATAAATGATGAAGCGGCATCAAATCGCAATGTTATAGCTGTTGTTAGTGTGCTAATGCCAGTATGTATCATATTaagaatgtgtatatattgtacTTCAGAGATTTACTGGAAAAAACAGACATGCCATTTTAGATTGCAGTATTATTTTCTCAGAGATTTATTTAGATACTAAAGTGTCAGTCATCCTCTGTCCCATACTGAGTCAAAGACTTGTTCAATAAACTAACATGAATATAA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU31137 lncRNA upstream 7134 17650767 ~ 17651301 (+) True G20953
TU31095 lncRNA upstream 85962 17572130 ~ 17572473 (+) True G20927
TU31072 lncRNA upstream 95071 17553374 ~ 17563364 (+) True G20915
TU31064 lncRNA upstream 142006 17503896 ~ 17516429 (+) True G20908
TU30906 lncRNA upstream 549741 17107992 ~ 17108694 (+) True G20803
TU31133 lncRNA downstream 20723 17689415 ~ 17690288 (+) True G20951
TU31199 lncRNA downstream 193375 17862067 ~ 17863081 (+) True G20994
TU31206 lncRNA downstream 231885 17900577 ~ 17901454 (+) False mrtfbb
TU31215 lncRNA downstream 256659 17925351 ~ 17929616 (+) False si:ch211-66e2.5
TU31270 lncRNA downstream 311475 17980167 ~ 18067318 (+) True G21045
XM_043225571.1 mRNA upstream 36214 17578740 ~ 17622221 (+) True baiap3
XM_043235997.1 mRNA upstream 87984 17566263 ~ 17570451 (+) True ube2ia
XM_043230820.1 mRNA upstream 208943 17423288 ~ 17449492 (+) True hs3st2
XM_043230135.1 mRNA upstream 274250 17381783 ~ 17384185 (+) True LOC122332748
XM_043234677.1 mRNA upstream 457805 17137930 ~ 17200630 (+) True LOC122341316
XM_043234014.1 mRNA downstream 10583 17679275 ~ 17685695 (+) True gper1
XM_043234012.1 mRNA downstream 23214 17691906 ~ 17715622 (+) False unkl
XM_043234011.1 mRNA downstream 23214 17691906 ~ 17708820 (+) True unkl
XM_043234013.1 mRNA downstream 23214 17691906 ~ 17708820 (+) False unkl
XM_043235999.1 mRNA downstream 201485 17870177 ~ 17901491 (+) True mrtfbb
TU31020 other upstream 462551 17163701 ~ 17195884 (+) False LOC122341316
XR_006250523.1 other upstream 541394 17113152 ~ 17117041 (+) False nsmce1
unassigned_transcript_287 other upstream 652450 17005914 ~ 17005985 (+) True trnat-cgu_1
TU30774 other upstream 958953 16690703 ~ 16699482 (+) False LOC122331507
TU31132 other downstream 50490 17719182 ~ 17723423 (+) True G20950
TU31207 other downstream 235912 17904604 ~ 17906643 (+) True polr3k
TU31290 other downstream 405705 18074397 ~ 18075574 (+) False LOC122341796
TU31277 other downstream 428953 18097645 ~ 18101932 (+) True si:ch211-157c3.4
XR_006250035.1 other downstream 737274 18405966 ~ 18425076 (+) True nubp1

Expression Profile