RNA id: XM_043234723.1


Basic Information

Item Value
RNA id XM_043234723.1
length 766
RNA type mRNA
GC content 0.44
exon number 7
gene id LOC122341391
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 28316600 ~ 28319709 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTTTGCATATTACAAAGCTCAGGTGATAAGGAGGAGCGACAAAGTACGACTACAGACTAAAGTGACACTAAAGAGCAGGCAGAAGAGAGTTTCtgATTCTGAAAGGAGAATGTCCCACACAGTCTTACCCGTGAACTCCTCAACACTCATCATCCAGATTCAACCACCGACACAAACAGCACCAGCCGGGACTGTGACCAATGCTCCTGTGCCTATTTATGAACAAGTAACAGGAGTTTCTCCTCTTCGTGGACTTCAGGCATTTCTGAAAGGCCAACCGAAAGCCCTTGGGACCGTCCAGATAATGATTGGTATATTGACTTTCCTGCTTGGGATCGTGTCTACAATTCATGCAGAATCCATATCTGTCTTTAGTGGTGTTCCATACTGGGGATCAATCATCTACATCATTGCAGGTTCACTCAGCATTGCTGCCGAAAACAAACTTAATTCGCCCTCCGGTTTGCGTTTGGTGAAAGGTTTACTTGGAATGAACATTTTCAGTGCTTTAAGTGCAGTCACTGCCGTTATTATAATTTCAATTGATTTGGCTCTAGGACCAATGCACATAAGTCACTGCAGATATGACTGTTATGATTTGGAGGAAAGGTATATGGCCTTCTTCTCGGGAATCGGTAGTGTTTTGCTGATATTTGCCTTGCTTGAGTTTATCATCTCCATCTATTTGTCATCATTTGCCTGTAAAGTAACCTGCTGCTGTTCTCCACAGGAGTTGAATGTTCCAGAAGTTCTACCTCGAATGCCT

Function

GO: NA

KEGG:

id description
K22190 MS4A3S; membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35738 lncRNA upstream 81064 28227075 ~ 28235536 (+) True G23953
XR_006248990.1 lncRNA upstream 280442 28034400 ~ 28036158 (+) True LOC122335654
TU35716 lncRNA upstream 371384 27942182 ~ 27945216 (+) True G23931
TU35622 lncRNA upstream 500411 27753439 ~ 27816189 (+) True G23873
XR_006248988.1 lncRNA downstream 1 28319710 ~ 28320156 (+) True LOC122335640
TU35756 lncRNA downstream 8756 28328465 ~ 28329411 (+) True G23964
XR_006248991.1 lncRNA downstream 74032 28393741 ~ 28394538 (+) True LOC122335662
TU36004 lncRNA downstream 384321 28704030 ~ 28705144 (+) True G24132
TU36022 lncRNA downstream 389071 28708780 ~ 28715865 (+) True G24138
XM_043232590.1 mRNA upstream 244023 27574258 ~ 28072577 (+) False LOC122334574
XM_043232688.1 mRNA upstream 248501 28036420 ~ 28068099 (+) True LOC122334736
XM_043233349.1 mRNA upstream 364143 27951751 ~ 27952457 (+) True LOC122335462
XM_043233179.1 mRNA upstream 586708 27728274 ~ 27729892 (+) True LOC122335347
XM_043233192.1 mRNA upstream 586708 27728324 ~ 27729892 (+) False LOC122335347
XM_043232766.1 mRNA downstream 273095 28592804 ~ 28650650 (+) False LOC122334878
XM_043232783.1 mRNA downstream 273100 28592809 ~ 28650650 (+) True LOC122334878
XM_043232794.1 mRNA downstream 273100 28592809 ~ 28650650 (+) False LOC122334878
XM_043232788.1 mRNA downstream 273100 28592809 ~ 28650650 (+) False LOC122334878
XM_043232797.1 mRNA downstream 273100 28592809 ~ 28650650 (+) False LOC122334878
TU35581 other upstream 1034194 27281849 ~ 27282406 (+) False LOC122335546
TU35317 other upstream 1469243 26846723 ~ 26847357 (+) True G23695
TU35299 other upstream 1515205 26798811 ~ 26801395 (+) False srsf2b
TU35969 other downstream 195934 28515643 ~ 28560324 (+) True G24115
XR_006248835.1 other downstream 273106 28592815 ~ 28647092 (+) False LOC122334878
TU36019 other downstream 387604 28707313 ~ 28708599 (+) False LOC122341395
TU36055 other downstream 524132 28843841 ~ 28846292 (+) False LOC122335482
TU36269 other downstream 909044 29228753 ~ 29230230 (+) False cenpx

Expression Profile