RNA id: XM_043234747.1


Basic Information

Item Value
RNA id XM_043234747.1
length 1770
RNA type mRNA
GC content 0.41
exon number 5
gene id g6pc1b
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12288422 ~ 12290984 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AATTTTCCCTCTATTTACTCCAGAGAGTCCAAAGCTCAGGTGGTGCCCAGTGACCAGGCAACAGAGAGGACGAATAAAAGGAGCAGGCTCATCTAGGTCGTCGCAGAGATGACAATCAGGATTCGCGACACTGAAAACATAATGAATTTCTTTTTACAAACAGCAGCTTATGCCTGCTAAGACTCATAATgctatataaaaactaaaagcatAAATGAGGATCTGTAACATTGCTGTTACAGACTTACAGTGGTAATGGAAGTCTTGTACGGTTATGGGATCAGCAGTACGCTATACCTGCAGACGCATTATGGACATGCCCAAAGCTGGTTTACATTTGTGTCTACAGTGGCAGACCTGCGTAcaacatttttatacttttttcctATTTGGTTTCATCTACAATCTGCAGTGGGAGTAAAGCTGGTCTGGGTTGCCGTTGTGGGAGATTGGCTCAACTTAGTCCTCAAGTGGCTTATGTTTGGCGAGCGTCCTTATTGGTGGGTTAAAGAAACTGTTTATTATGGCAACTTAACTGTACCGCAAATCAAACAGTTCCCCGTGACATGCGAGACTGGCCCTGGAAGTCCCTCCGGTCATGCGATGGGAGCTGCAGGGGTTTACTATGCCATGCTCACGTCACTGCTGACGATTTTGCAGGAGTATGACCCCCTTAAAAGATGGTGCTTGCAGGGTCTTCTTTGGGCCCTTTTCTGGGGTGTGCAGGTTTGTGTCAGTCTCTCTCGAGTCTTCATTGCAGCTCATTTCCCACATCAGGTCGTTGCGGGAGTTGTTTCAGGAATCGCTGTGGCCAAGGCGTTTAATAGAGTGTCCTGGATCTATTCAGCAAGCTTGAAGAGTTATGTGCACACAATCCTCTGTCTAGTGTTTATTGCACTGGGGCTTTATGCATTGTTGGACGCTGCTTCGATAGACCCCTACTGGAGCCTAATGAAGGCACAGAAGTGGTGCTTTCAGCCTGAATGGGTCCATCTGGATACTACACCCTTTGCTGGCCTCCTCCGCAACACCGGGGCCCTGTTTGGACTAGGGCTGAGCCTCCATTTGCCTATTCATGGTGATCTGCAAAAAAACAGGATCTGTGAAAACAGCGCCATTTACAGACTAACCTGTACAGCAGCAACACTGCCTCTCCTGAGCCTCTTAGACTCATTCAGACCTCCCACAAGCACTCGTGCGCTCTTCTATGCACTTTCTTTCTGTAAAAGCGCCACTGTGCCTCTAACCACAATACGTTTTGTGCCTTATTGCATGAGCATATTAGCAAATGTATACCACAGAAAGAAAGCATATTAAACTCAGATTCTATTAAAATCAAGCTCATTAAGATTAAGTCTGAAATTAAGTCTGTATTAACTATTTTCCTCACTTTgcctgttttaaaatatttcagtgtaaGTATGATTCTTGAAAACCAAAGATTactttatatgattttattttaatgcatgcatactGAATTAAGCAGAGATATCACCAGGAATATCCAATgctatacataatataatacacaatataatacatatatttcctGATGAAAAGAGATCAAACAactataattatatgtattaactataatacatgtattaaatagtatgttttataatatctgCTGGCCAccattattgtttgttttttttcccttacatTTTGTATACTGTGAtaaattgtttgtgttttataattgTTCATTGTCTAAATGTAGCTGAAAAGCTTATAATAAACTGTTCAATGGCAGTTTTAGCTGTG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250458.1 lncRNA downstream 17486 12267862 ~ 12270936 (-) False LOC122341243
XR_006250459.1 lncRNA downstream 17488 12267862 ~ 12270934 (-) False LOC122341243
TU28999 lncRNA downstream 17529 12265845 ~ 12270893 (-) True LOC122341243
TU29054 lncRNA downstream 58043 12226575 ~ 12230379 (-) True G19518
TU29033 lncRNA downstream 105938 12182258 ~ 12182484 (-) True G19503
XR_006248508.1 lncRNA upstream 3156 12294140 ~ 12295423 (-) True LOC122332655
TU29090 lncRNA upstream 48718 12339702 ~ 12342331 (-) False LOC122342093
TU29186 lncRNA upstream 398636 12689620 ~ 12691332 (-) False cacna1aa
TU29337 lncRNA upstream 573326 12864310 ~ 12886954 (-) False G19677
TU29341 lncRNA upstream 573326 12864310 ~ 12886207 (-) False G19677
XM_043234744.1 mRNA downstream 546 12279708 ~ 12287876 (-) False kat7a
XM_043234742.1 mRNA downstream 547 12279708 ~ 12287875 (-) False kat7a
XM_043234743.1 mRNA downstream 548 12279708 ~ 12287874 (-) False kat7a
XM_043234739.1 mRNA downstream 549 12279708 ~ 12287873 (-) True kat7a
XM_043234740.1 mRNA downstream 550 12279708 ~ 12287872 (-) False kat7a
XM_043234981.1 mRNA upstream 6070 12297054 ~ 12300573 (-) True aoc2
XM_043233704.1 mRNA upstream 24466 12315450 ~ 12320066 (-) True LOC122336412
XM_043233705.1 mRNA upstream 24466 12315450 ~ 12320021 (-) False LOC122336412
XM_043235875.1 mRNA upstream 31260 12322244 ~ 12332841 (-) False LOC122342092
XM_043235876.1 mRNA upstream 31260 12322244 ~ 12332841 (-) True LOC122342092
XR_006250490.1 other downstream 367655 11913002 ~ 11920767 (-) False LOC122341756
TU28873 other downstream 425459 11853748 ~ 11862963 (-) True G19383
TU28829 other downstream 560447 11715722 ~ 11727975 (-) False limd2
TU29176 other upstream 331799 12622783 ~ 12679800 (-) True G19606
unassigned_transcript_278 other upstream 690103 12981087 ~ 12987204 (-) True LOC122331923
unassigned_transcript_279 other upstream 696366 12987350 ~ 12992329 (-) True LOC122331939
TU29331 other upstream 715012 13005996 ~ 13068190 (-) True G19676
TU29371 other upstream 756057 13047041 ~ 13047494 (-) True G19700

Expression Profile