Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043234771.1 |
| length | 3478 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 16 |
| gene id | carm1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 13116031 ~ 13129608 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0048742 | regulation of skeletal muscle fiber development | biological_process |
| GO:0034971 | histone H3-R17 methylation | biological_process |
| GO:0033146 | regulation of intracellular estrogen receptor signaling pathway | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0045600 | positive regulation of fat cell differentiation | biological_process |
| GO:0009405 | pathogenesis | biological_process |
| GO:0019919 | peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0030374 | nuclear receptor coactivator activity | molecular_function |
| GO:0035242 | protein-arginine omega-N asymmetric methyltransferase activity | molecular_function |
| GO:0070577 | lysine-acetylated histone binding | molecular_function |
| GO:0035642 | histone methyltransferase activity (H3-R17 specific) | molecular_function |
| id | description |
|---|---|
| K05931 | CARM1, PRMT4; type I protein arginine methyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU29256 | lncRNA | upstream | 1184 | 13112520 ~ 13114849 (+) | False | si:dkey-204f11.64 |
| TU29201 | lncRNA | upstream | 23393 | 13088254 ~ 13092640 (+) | True | G19626 |
| TU29203 | lncRNA | upstream | 33879 | 13077933 ~ 13082154 (+) | True | G19628 |
| TU29199 | lncRNA | upstream | 39339 | 13072133 ~ 13076694 (+) | True | G19624 |
| TU29211 | lncRNA | upstream | 43434 | 13061117 ~ 13072599 (+) | True | G19636 |
| XR_006248092.1 | lncRNA | downstream | 10674 | 13140282 ~ 13152319 (+) | True | LOC122330830 |
| XR_006250467.1 | lncRNA | downstream | 42431 | 13172039 ~ 13173224 (+) | True | LOC122341519 |
| TU29398 | lncRNA | downstream | 96951 | 13226559 ~ 13227185 (+) | True | G19722 |
| TU29447 | lncRNA | downstream | 214887 | 13344495 ~ 13351575 (+) | True | G19757 |
| TU29446 | lncRNA | downstream | 226608 | 13356216 ~ 13357051 (+) | True | G19756 |
| XM_043234628.1 | mRNA | upstream | 1177 | 13112477 ~ 13114856 (+) | True | si:dkey-204f11.64 |
| XM_043234624.1 | mRNA | upstream | 8186 | 13103276 ~ 13107847 (+) | True | aldh3b1 |
| XM_043229415.1 | mRNA | upstream | 141406 | 12972477 ~ 12974627 (+) | True | LOC122332118 |
| XM_043229474.1 | mRNA | upstream | 215817 | 12895326 ~ 12900216 (+) | True | LOC122332168 |
| XM_043235716.1 | mRNA | upstream | 343851 | 12770572 ~ 12772182 (+) | True | alkbh7 |
| XM_043234775.1 | mRNA | downstream | 5062 | 13134670 ~ 13136750 (+) | False | timm29 |
| XM_043234776.1 | mRNA | downstream | 5272 | 13134880 ~ 13136750 (+) | True | timm29 |
| XM_043229861.1 | mRNA | downstream | 24899 | 13154507 ~ 13162307 (+) | True | slc25a23b |
| XM_043229869.1 | mRNA | downstream | 24899 | 13154507 ~ 13162307 (+) | False | slc25a23b |
| XM_043235227.1 | mRNA | downstream | 34388 | 13163996 ~ 13170254 (+) | True | znf207a |
| TU29192 | other | upstream | 128120 | 12835381 ~ 12987913 (+) | True | LOC122332158 |
| unassigned_transcript_277 | other | upstream | 227972 | 12887157 ~ 12888061 (+) | False | LOC122332158 |
| XR_006250478.1 | other | upstream | 587230 | 12519837 ~ 12528803 (+) | False | gtpbp1 |
| TU28786 | other | upstream | 602312 | 12511926 ~ 12513721 (+) | False | G19326 |
| TU28787 | other | upstream | 602312 | 12511926 ~ 12513721 (+) | False | G19326 |
| TU29613 | other | downstream | 568966 | 13698574 ~ 13702353 (+) | False | rbbp6 |
| unassigned_transcript_286 | other | downstream | 784015 | 13913623 ~ 13913694 (+) | True | trnat-cgu |
| TU29734 | other | downstream | 919882 | 14049490 ~ 14053032 (+) | True | G19973 |
| TU29797 | other | downstream | 988859 | 14118467 ~ 14119570 (+) | True | G20015 |
| XR_006248644.1 | other | downstream | 1125882 | 14255490 ~ 14267791 (+) | False | abcc1 |
