RNA id: XM_043235016.1


Basic Information

Item Value
RNA id XM_043235016.1
length 7082
RNA type mRNA
GC content 0.49
exon number 26
gene id evplb
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2513221 ~ 2542538 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCAGGAGCGTGAAGAGCAGGAGCAGCGCTAGCACCAGCAGTAAAGCGCTCACCCGGTGCCTCCAGAGCCAGCGCAGGCCCATCTCCACCAGCACAGCCCCAGACGAGCTGCACGGCGCTCAGTGGTCCGTCTGAGATTGTTCCTCCGACTCTCTAAACCAGACGTCTTGTTGACTCAACCCTCCACGCGTCCTGCTTCACTACGAGAGCTGCTTTACTCTTTCTCTGATGACATTTCATGCCAACTCTAAAGGTCAGAAATTCGCGACATGCGCGCCTGAAAAGATTTCAAACCCCACACGTTTAAAAGAGTCTTTCATGCATGACCGCGTCGCTCATCAGCACAGATCCACACCTTCCTGATGAATCTCACCCCGACGTCAATCAAGTCGCTCTTCACACAAAGCACTTTACAGTGAAGGGCGAGGCGAGCGTGTTTCCAGCGCCGTACTCAAGTAAATACTTCTAGAAATATGTGCAAAGTGACAGAGGAGTGATCGGTCCTGTCTGATTGCAGGAGAAGAACCTGCAGGGCATCAAGACTATTTGGAGAAAAACCTGAACAGCAGGTCATTCGATCAGGTTTGTCGAAAGACGGGCGAAAGTTGCAGAAAGAGGAAGAGTGTGCCGGAGAGAAATTGTGAGGGCAGGAACAGGTACGTCCAGTCTGAACCGCCCGAATGTGACACACCTGTTTCAGGGGGCGGAGTCACAGCGGCTGACAGGCAACCATAACACAAGACCTCGACGGCTCAAAGACACACAGACGCAgagaccaaacacacacacgcagcacgCGGGATGTTCAAGAAGAAGGAATACAGTCTCGTCAAGGCCGGACAGTCGCAGGCCAATGACATGCTGGCTGTGACTACACGCCTGCAGCAGAACGCCGACCAGGTGGAGAAGAATGTCCTGCTGGCCGACAAACTGCTGCTGGAGGATCTGGAGAGCAAGCGCGCCGGCACTCCCCTCAAACAGCAGGGTCCGGCCGCGGAGAACCTGTCTCAGGCCGAGATCTTACTGAAGGACCTCTTCATGGACGTCAGCAAAGCCAAAAAACTGCAGCACCCTCAGGCCAGCGAGATCGAGCTGGAcgtgaGTAACCTGCACGAGCGCTGGTCCAAATACTGCAGCACCTACAGAGATCTGTACGGCCAGCTCCACGAGCTCTACCTGCCGCCGGGAGTCGACTGGAGCAAGCTGCTGGCGGACAAACAGaagctGATTCAGGGAGATGTTTATGGTCCGACTTTGTCTGATGTGGAGAAACAGATCGCAGCCCATAACATCCTGCATAAACAGATGGAGGCGTATCGCTCGGCCCTGGAGAACAGCGCTGACAACTCGTCCGCTCTACAGAAGCAGTACGCAGATGTACAGgaggCGAGCGAGCAGCGCCGGCAGCATCTGGCGTCTCTCTATGAGTTCATGCACAGCTGCAGTAGAGAGCTGCTGTATCTGAGCGAGCAGCAGCAGAAGATCATCAGCAGAGACTGGAGCGAGCGCCTGGTAGACAGCGCCGGGGTGCGCATGGACTACGAGAGGTTCAAGAACAACGGTCTGCTGTCACACGAGAGGGAAGTGAGCAAACTACAGGAGGACGCCTACGCTCTGATTGATGACAAACACCCCGGGTCAGCCGCTGTTAAGGCGTACAGCGCAGACGTGTCCAGAGAGTGGCAGCGATTCCTGaatctgtgtctgtgtcaggacacacacctggacaacGTGGAGGCATACAAGAAATATCAGCTGGATTTGGAGACGTTCACCGAGTCGCTGAAGAGAATCAAATCCACGACGGAACCATCAGCGCTGAACAACATGAGCAACCCTGAGATCCTGCTGACGCTGGAGggCGAGGAGAGGTCCATCATGAGGAACGAGCAGCGTCTGGCGGATCTGAGCGAGCTCTGCACCAGCATCGCTCCTCTACACCTGCGCCGGAGCACCGCTAACAACCCCATCAGCGCCATCGCCCTGTGCGACTGGAGCACTGACAAGGGCTCTGTGAAAAGAGGCGACAAGGTCACGCTGGTCTCTGATCCCAGAGAGGAGGTCTGGGAGGTGAAATCCAGCGCCGGAGAGACCAAGCTCGTCCCAGGAGTGTGCTTCCTCATCCCGCCGCCTGATTCAGCAGCCATCAACAAGGTGGAGAGTCTGAGCAGGGATTTCTCAGATGTGAAGAGGACAAGGTCAGCTCTACAGACCCAGGTCAAGACACCGACCGTGGAAGTCATGCCGTTCGTAAAACAAGTTGCTGTGGCCACCGTTCCTGACAACGCAAAGGCTGGCCTCATCGACGGTCGACTGGAACAGATCTATTTGGACCTGCTGAAGTTAGAGAAGGACATCCAGAACAGAATGAGGTCTCCGTTAGATCGCACTGCACCCATCGGAGATCTGTCAGCCAGAATCAAAGACCAGGATAGTTTTGTCACGATTCTGAAGAAACTGGAGGCAGAGAAAGCATCGGCTCAAAGGGAGATGGAGCCCCTGATATCCCAGAAACCCCTGGGGCCCACCACATCCTCGCTGCCTCTGAAACTGAGCAAAGTCAGCAACAAGATCGACGACATCACCGCCCTCTCGGACCTCTACAACAAGAAGGCCACGTCTTCCATGTTCCTGGAGAAACAGATCAAGAAGGTGGACAACATGCTGACAGAGTTCGAGAATCAGTTGGTTGCAGACACTGGCATCTTAGATGAGCCCAACGCCATCCGCATCCACTCCAAGCAGCTGCAGatCATGAGCAAAGAGGTTGCATCCAAGAAAGATGACATCCAGCAGCTGAACCGTGAGCTGGAAGTCACAGAGCAGGCGTGCAGCTCTCTGCAGAAGAGCTTCCAGGAGTATTGCCCTGATATCCGCCATCAAGAGACCGAGGTCAGGCGCTTGAGGAATCGCTACTCTAACATCAACAGTCAGCTGCAGCAAAGGGCGACCCTGTTGCAAGAGGCTGTCAATAAAAATCAGGAATTTACCAATGCCATCCAGTCGCTTACTGCTTTCCTCATCAATATGCCCAATAACAAAGTTCAGCCTGGTGAAAGTGTGTCACAAATCTATGCCAAGCAAAACTCTCAGATGAGAGCAGTTGAAGACATCAAGAGAAAGCAGGATGATGTAAACCGTGTGGTGAAACTTTCTCGTGAACTGCAGAGTGCTCTTAATGAGTATGAgctgaattcaaataaatacagaagtGCATTGGGAAAACCAGagataaatacaaaaagcacTGATTACATCACGCTGGCTGAAGCTGTGCAGAGGAAGGAAAGGGATGTTGTGAACCTTTACTCTGAAGTATCAGCACAGAATAATCAACTATTGAATCAAGTGATCTTGGCCAAGGACCTCGTCAACAAGAATGATGAAATTGTGAGCCATGTGGTGGTGAGGCAACAACTTCAGATGCAAAGTCAGCAGAGAGACATGGACGAAGTTGACGGCCTGAAGCGTGAGCTGTCTGAGGAAATATCTCGCCGTAGTCATGCCGAGAATGATTTAGCCACCTACAGGAAACGGATGATGTCCCTGAAGAGTCGGAGAGGTGTGGAGCGAGTGGAAGAAAAGGAAACCGTACATTACTACCGTGATTCAAAGCTGGAGGCCGACTTGGAAGCACTGAAGATGAGGATAACTGAAGAATTCCATAAACGATCCCAACTGCAGACAGAAATTGAAATTGTCAATCAAAAAATTGTAAGTCGTGAACGAGAGATTATTGATGTAAAGCCCAAGCTGGTGACAAAAGTTCTTACAGAAATTGAGCGTGATCCCAAATTGGATATTGAAGCTACGAGGATCAGGGAGCTCATACGCAAACTAAGGGAGGAAATTCGAGTGCACGAGAGTGAAACGGTACAGATGAGAACAGAAGTTACTGTCTTGGAGACCAAGAGACCAGTAATCAAAGAGAAAGTGGTCTTGAAAGAGGTTGTGAAGCTGGAAAAAGATCCCGAAATGCTGAAATCTGTGATTATCTTGAAGAACGAGATTTCGGATGAGGCTATGAGATGCCAGAACCTGAATGATCAGATATTCCATATTAGGAGTCAGATCAATAATCTGGAGAGGATTATTCCAACTATACAGCCGAAAACTATCATCAAAGAGGTAAAAAAGGTTGAGCAGGATGCCGATCTCCTACAAGAGTCCAAGACCCTTCGTGTACACCTGGAAGAGCTCATTCGAGAATACAGTATTTTGATGAAAGAGTTCTCCAGCCTTCAGCTCCGCTACAGCCAAGTGGAGACCATCAAACAAAAGGTAGAGTTTAATGAGATCATCCATGAGATCTTTAGAATTGACCCTGAGACAGAAATGGAACTGAGACGGCTGAGAAGCGAGCTTCTTGAAATAAGCAAACGGCGTACTAGCattgaaaatgaaatcaatGTGATCATGGTGGATCTAAAGACTCTGCGTGCCGAGAAGCCCAAGGTTGAAATAAAGGAGATGACTCGAGAGGTAGTGAAAGAAGAGAGGAGTCCTGAAATTGTCAAAGAAATTAAGAGGTTGAATGAGCAGCTTACCATTTTGAGAACCAACTATGACTCCACTATGAATCGGGTGATTCGTCTACGCAAGGACAGGGATGAGTGGAAGGCCGAAAGATCAAAGGTGGAGACCAAAGTGGTGACCAAAGAATTGATAAGGTATGAAAATGACCCTCTTCTGGAGAAGGAAGCTGAACATCTCAGGAGGGAAGTACGTGAGGAAGTTCTGCGTCGTCGAACAGTGGAGGAGAATGTTTTTGACCTTCAAAACAAGTATATTGTGCTGGAGAGACAGAAACCAGAGGAAAGGGTTGTGGTTCAAGAAATCGTACGCCTGCAGACAGATCCGAGTCAAATTCTGGCTCATGAGAGGTTAGTCAAGACATTGGAAGAGACCATCAAGGGTCGTAGGCAACTTGAACTGGAGGTACAGCAGATGAGATCTCTAGTCCTGGAGCTGGAGAAGAAGCTGGAGCTCGTGGATCGGCAGAAGAAGATCCTAATAGAGACAGAGCTGAGGCAAATCAAGGCTAGAATTTATGAACTTGAAACCTGCCCAAAGCCTGTTGAGGAAAAGATTGTTATTGAGGAGGTTTTGAAAGTTGAGAGAGACCCTACAGTCGACAAACTAATCACTGACCTTCGTACCACCCTGGAAACCGAGAGTGCCAGCTTTACTCGCCTGCAGAGAGATATTCGAAACCTCAAAATCAGGGTAGAATCCCTTACCAAAGAGAAATCTGTAGAGAGGGTCATCCACAAAGAGGTTATCAGGGTTGAGAAGGACCAAGCggtagagacagagagagaaaacctCAGAGCTCAACTTACCCAGTTGAAGAATGCTAGAGCCCTTAAAGATGAAGATCTTCTGAGACTCAACAACAAAATAACTCGAATTCAGACAACCAGAACCAATTTCTCTCAAGAGGAGACCACCTTGATTGTTTACAGGGATAGAATCAAGAAAGAGCAAAACGAACTTCTCCAGGAGTTGAGAAGACTGGAGTCTCAAAAGCAGGAGATCACCATATCTTTCCAACATCAGACCAAACTCTTGAGTGAGAGGAACCAAGTCAACAGACAAAAGACCATCAAGCTGGAGTCTGAGATCCAGCGTCTGGAGAGAGAAATCCTGGAAGTGAAAGAACTTATCAACCAGCGAGAAATCACCATCATGGACCTGCAGAAACAAGCAAAGGCAGCGCAACATACAGAGACAAACACCAGAGAGACCAACGTCTCCACCAAAATCACCATTTTGGACCCAGAGACTGGCAAAGACATGTCACCCTATGATGCCTACCTTGAAGGTCTGATTGATCGCAATCAGTACATCCACCTTCAAGAGCTTGAGTGTAGCTGGGAGGAAATCACAACCACCGGTCCTGAAGGTGAGACCACTCTTTTGCAGGATCGTAAAAGCGGAAAGCAGTACTCCATCACTACGGCCCTGCAAAATGGCAGACTGACCCAGTATGACCTTCAGCGCTACAGAGAACACAAAATGACCATttcagagtttgctcttctggTTGCAGGGGAAAAGAAATCAAAGTCCTTCCCTCCTCTAAGTACAACACAAACAACCACTGTTCAGACAATCGCTCCCACAAACTCCTCCACATTGACACGTCGCTTATCCTACTCTAGCAACGGCAACTTGAACTCGCTGGTAACCACCAGTGGAGATGAGCTCTTCCCCATTTCTGGTATCTTAGATGCCACCACAGACAGCCGCATGTCTGTACGAAGTGCCCTAACACGCAAACTGATAGATCAAGACACAGCGATGAGGCTTCTGGAAGCTCAGGCTGCCACCGGAGGTATTGTGGACCTGAACAAGAAGGACAAGCTCTCTGTTCACAAGGCAGCAGAGCGAGGATTGATCGATTCGAGCCACCTTCCAAAACTCCTCAGTGCCCAGAAGGCCTTCACTGGTTTTGAAGACCCTGTGTCCAAAGAGCGAATGTCAGTGGGAGAAGCTGCCCGCAGGGGATGGATCCCCAACGACAGTGCGGTGTGGTTCATGAAGGCACAGGTACTGACCGGCGGACTGGTAGACCCAAAACGAGCAGGTCGCATCGACATGCAGAAAGCCATTGATACAAAACTGATCGACGGATCCCTGGCCAAGCAACTTCAGGATGATTCCACCTTCGTGAAGAACGTGACCGACCCCATCAAGAAGGAAAAGATCACGTATAAGGAAGCCATGGCTCTATGCAAGAGGGACCACACCACAGGGCTGCTCCTGCTCCCAGCTGCCTCGACTGACACTGTTGATACTCCATCCTATTCCAGCTACAAATTCTCCAAAAGATAAAGACAACACGCAAGAGTAAATACAGATTCAAGTTCTGCATAGCAAGGGCGTTCTGATTCTAGGGCTTTTATCATAAACATATATAGGATAATCACTGGAGCCTTTCatactttgacatttttatcttttcctgtctttttttttttaaatgctctttCAGTTACTCATTATTTCCTGGTTAATCTTGATGAATGGGTTGTTGAATTGCTTTTTGAACTTATAATAAAAAGTCCTGTTTCATACCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU24271 lncRNA upstream 78709 2426408 ~ 2434512 (+) False G16327
TU24270 lncRNA upstream 83659 2426408 ~ 2429562 (+) True G16327
TU24142 lncRNA upstream 139143 2314300 ~ 2374078 (+) True G16227
TU24241 lncRNA upstream 157150 2296867 ~ 2356071 (+) True G16310
TU24239 lncRNA upstream 157291 2296867 ~ 2355930 (+) False G16310
TU24291 lncRNA downstream 21950 2564488 ~ 2565843 (+) True G16344
TU24312 lncRNA downstream 59300 2601838 ~ 2602340 (+) False G16358
TU24311 lncRNA downstream 59656 2602194 ~ 2602537 (+) True G16358
TU24310 lncRNA downstream 89257 2631795 ~ 2634380 (+) True G16357
TU24543 lncRNA downstream 118337 2660875 ~ 2667259 (+) True G16484
XM_043235039.1 mRNA upstream 4115 2501588 ~ 2509106 (+) True atg4db
XM_043235060.1 mRNA upstream 12205 2497983 ~ 2501016 (+) True LOC122341595
XM_043235017.1 mRNA upstream 38223 2449475 ~ 2474998 (+) True mast1b
XM_043235048.1 mRNA upstream 89671 2422071 ~ 2423550 (+) True junbb
XM_043235020.1 mRNA upstream 142585 2357686 ~ 2370636 (+) True LOC122341566
XM_043231017.1 mRNA downstream 37004 2579542 ~ 2584978 (+) True LOC122333418
XM_043235018.1 mRNA downstream 66701 2609239 ~ 2615973 (+) True LOC122341564
XM_043235025.1 mRNA downstream 74734 2617272 ~ 2627120 (+) True gga3b
XM_043235026.1 mRNA downstream 74734 2617272 ~ 2627120 (+) False gga3b
XM_043235063.1 mRNA downstream 98608 2641146 ~ 2646756 (+) True sumo2b
TU24191 other upstream 347607 2160845 ~ 2165614 (+) False LOC122333054
TU24133 other upstream 398882 2112037 ~ 2114339 (+) True G16223
TU24128 other upstream 449437 2056681 ~ 2063784 (+) False G16222
XR_006250539.1 other downstream 22349 2564887 ~ 2564955 (+) True LOC122342193
TU24296 other downstream 25546 2568084 ~ 2568999 (+) True G16347
TU24318 other downstream 98674 2641212 ~ 2646750 (+) False sumo2b
TU24319 other downstream 98674 2641212 ~ 2646750 (+) False sumo2b
TU24591 other downstream 740452 3282990 ~ 3283656 (+) True G16530

Expression Profile