RNA id: XM_043235133.1


Basic Information

Item Value
RNA id XM_043235133.1
length 2428
RNA type mRNA
GC content 0.48
exon number 12
gene id engase
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13987076 ~ 13994375 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAGAAATTACCGATTTGTCTGGAAACTAGCTATCCGTTGACCTTTTGTAAATGGAAAGTGTTTCTTCAAAAGAGAAAGATAACATGACATCCCGCAAACGAAAAAGGGAAGGGACGAGTGCTAAAACCGAGGAGAACAGCAATCCACTATGATCCTGACACAACTGAGCCCATCAGCTGCAGTCTGAAATCTCTCGAGGAACTGTTGTCGTGGAAACGCAATGAAGCAAGTCCTTTTAATGTAGCCACTGTGCCTTTGGCTAGCAGGCATCCTCCACTGAACAGCTGCCCTAGACGGACATTGGTGTCCCATGACATGATGGGTGGCTACCTGGAGGACAGGTACAACTCAGAGGTTAACGGTTTGATTTTTAAGTATGTTATGTCagtttctttagttttttttttcatggtccTGTCTTTTCTGCTGAGGTTCATTCAAGGTGCAGAGGTGGAGATGCCATATGCTTTCTATCACTGGGAGTATATCGACATCTTCAACTACTTCAGTCATCAGATGGTAACCATACCTCCTGCGGTTTGGACAAACGCAGCACATAAGCATGGGGTGCTCTCTATAGGCACGTTCATCACGGAGTGGACAGATGGAGCAAAGACGTGCGAGGCCTTCCTTGCAGATGAGGAGAGTTACCGCGCTGCTGCTGATAAGCTGGTTCAGATTTCCCACTGCTATAGCTTCGACGGCTGGCTCATTAACATAGAAAATACGCTGAGTGAGACTGCGGTGAAGAACACTGGACCCTTTCTCCGCTACCTCACAGACCAGATGCACGAGCGCGTTCCAGGCAGTGTGGTGATCTGGTATGACAGCGTGCTGAAAAACGGCTCGCTCAACTGGCAGAACGAACTCAATGATGACAACAGAATGTTTTTTGATGCCTGTGATGGAATATTTACTAACTACAACTGGACAGAGCAGAGTCTGGAGTGGATGAAGTCCTACTCTGCCGCTCAGGGCCGCTTTGCTGAAATCTATGTTGGTGTTGATGTGTTTGCGAGAGGGAAGGTGGTCGGAGGGAAATTTGAGACCAATAAGgCTCTGGAGCTTATTCGGAAGCATGAATTTTCAACAGCAATATTTGCTCCTGGGTGGGTGTATGAGTGCCATGAAAAGGAAGATTTCCGCCAAAATCAGGACAAGTTTTGGAATTTGCTGTCTGATTTCGTTTATATCCACCGGCCCTCGTCCAGTCTTCCCTTCATCTCTTCATTCTGTCAGGGCTTTGGAAAGAGCCTGTACTGGCGTGGACAGGTGGAGATGAAGAGAAGCTGGTTTAATCTGCACGCTCAGGAGATCCAGCCTTTGTACCTTTCTCAGGACCTGAACAATGATGGCTGGCTGAGAAGTCGTGGCTGCTCGGACGACGCTTGGATCGGTGGCAGCTCTCTGATGCTGGAGGGCATGGTTCCATCTGGACTTTCTGAAGTCTGTGCAAGGATATTTTCTCTCCATGTTCCCTTGGCCCCCAAGACGTTTGTTTCTTTTGTCTACAAGCCACCAGCGGGGGTTAAGATATCCTTGGAGCTCAAAACGATAGATGGTCCCCTGTGCACATTCGATGGGACGGAGGAAATAGCATCTAGCAGTGTGTTTCCAGAAGCGTTAGCAGAGGATAATCAGTTGGTTGAGCAGTTTGCGCGGAATTGTGGCCGTTGGACATTGGATGGCTGGGCTACCAGATGTTTCCTGTTGAAAATGAATGGCTGCTCACTGCGAGAAGTTTGTATTCGTGTTTCCCGAGATGAAGGCAATGAAAATGTTTCCTTCAGGTGCAGGATTGGAGAGATTATGctGTTAGATGCAGAGAGTCTCCAATCACCCCTGCAGTCAGTCAAAGGCATCTGTGTGAATGATGTGGTGTGGCACACAGGTGCTTTGAAGGGAGACGGACACACgctaaaggttttttttaatgccaccTTACACTGGCAATACCCCACCCAACAGGTCCGCCATTTCCGGATTCACTGGAAGCATCTCCGCGGCCCTGACCCTCGCAACCCTCCTGGTCCATTGACTCTGATTGGCCGATCCTACTCTAACCTGTACCGTGTGGTGGAACTGGAGGTGCCTGCTGCTCCGGGTCTCATAGAGCTGGTGGTGGAGCCTGTGAGCAGAGAGGGATTCAGAGTGCCTGAAGCACAGTGGGGCCGACGCACTGTCAGCTACAGCGCCAGTTCCCCGGAGAGCCCATCAACGTGAAAGATGACTGCCTTAATACTCTATAACTCACACGCCATATAATCTCACTTCTATTTTATATGCAGTATAAATGCGTGATGAGTTGGTgctaaatatgtatttagtGGTTTTTGAATGACTGAAAACTTTATTGAAGAAGCGGCAAATCAAATTTGTACtatatgcaatattatatactttattatagTAAAAGCCGTTTTATGTA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005829 cytosol cellular_component
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250534.1 lncRNA downstream 56799 13917700 ~ 13930277 (-) True LOC122342150
TU29698 lncRNA downstream 88144 13897631 ~ 13898932 (-) True G19947
TU29639 lncRNA downstream 194474 13786009 ~ 13792602 (-) True gng13b
TU29640 lncRNA downstream 194843 13786009 ~ 13792233 (-) False gng13b
TU29594 lncRNA downstream 353291 13633559 ~ 13633785 (-) True G19872
TU29815 lncRNA upstream 65253 14059581 ~ 14060492 (-) True G20029
TU29913 lncRNA upstream 208603 14202931 ~ 14204305 (-) False si:dkeyp-72e1.6
TU29920 lncRNA upstream 225757 14220085 ~ 14221797 (-) True G20095
TU30071 lncRNA upstream 391033 14385361 ~ 14388398 (-) True G20202
TU30083 lncRNA upstream 439377 14433705 ~ 14459554 (-) True G20212
XM_043235135.1 mRNA downstream 4865 13978194 ~ 13982211 (-) True coil
XM_043235822.1 mRNA downstream 10192 13938088 ~ 13976884 (-) True rab11fip4a
XM_043235823.1 mRNA downstream 29258 13938088 ~ 13957818 (-) False rab11fip4a
XM_043235824.1 mRNA downstream 30977 13938088 ~ 13956099 (-) False rab11fip4a
XM_043233929.1 mRNA downstream 74623 13902654 ~ 13912453 (-) True suz12a
XM_043233728.1 mRNA upstream 9011 14003339 ~ 14026070 (-) True csnk1da
XM_043233727.1 mRNA upstream 9011 14003339 ~ 14026069 (-) False csnk1da
XM_043235001.1 mRNA upstream 41992 14036320 ~ 14043502 (-) False gps1
XM_043235000.1 mRNA upstream 41992 14036320 ~ 14043502 (-) True gps1
XM_043235907.1 mRNA upstream 49980 14044308 ~ 14048699 (-) True rac3a
TU29676 other downstream 181098 13805368 ~ 13805978 (-) True G19933
unassigned_transcript_285 other downstream 886432 13097129 ~ 13100644 (-) True LOC122341774
unassigned_transcript_284 other downstream 894230 13092210 ~ 13092846 (-) True LOC122341304
unassigned_transcript_283 other downstream 899809 13086375 ~ 13087267 (-) True LOC122332140
unassigned_transcript_282 other downstream 902110 13084026 ~ 13084966 (-) True LOC122341303
TU30091 other upstream 440822 14435150 ~ 14439541 (-) False mlx
TU30092 other upstream 441887 14436215 ~ 14437040 (-) False mlx
TU30093 other upstream 441887 14436215 ~ 14439541 (-) True mlx
TU30094 other upstream 441887 14436215 ~ 14439541 (-) False mlx
TU30272 other upstream 1126478 15120806 ~ 15179228 (-) False plcd3a

Expression Profile