RNA id: XM_043235218.1


Basic Information

Item Value
RNA id XM_043235218.1
length 1754
RNA type mRNA
GC content 0.47
exon number 3
gene id mpg
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9755181 ~ 9761184 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGGGCTACTGAAACTGAAGCCGAAGTGTGAAGTAGCAGGTGCTACTCCGTTTTCAATATACATCGACTAAATACAAGATAAACAGCGCACGATTTTAAGTATTTTCAGTTATACTTATTTAGAGTAATCAGCACTAATAGGAACATGTAACGTTAGCATCTTGCTAAATATCGCGCCATGCATTCACGAATAGCGCCAGGATACATTTAGGATATTTTAGACATACTTGAGTTAGCATTACACTGCGAATTATGTGCAGACACAGATAGAAAGCCTACAGCAAACCGGTTATGGTTTGGCAAAACACAGCTGCCTAATATCCTGTAGCATTTATAATGACAACacggaaaagaaagaaatctttaCCTCAGGCAGAGTCCTCCAGCGTTCAGACTCACAGTGAACCTCTGAAGAGACTCGGTCTATCTGACACGAACCCTGCCGGTCATCTTCACAGCCCTTATTTCTCGACGAGAGAGTCTGTCAGACTGAGTTACAGCTTCTTCGATCAGCCCTGTGTTGATCTGGCAAAGGCCTTTCTCGGCAAGGTGTTGGTGAGGAAGCTAACCGATGGCACTGAGCTCAGAGGAAGGGTTGTGGAAACCGAAGCATATCTGGGTGGAGAGGACAAAGCGTCCCACTCAGCAGGAGGGAAACGCACAGAGAGAAACACGGCCATGTTCATGAAACCTGGGACCATCTACGTCTATCCCATCTACGGCATCTACCTCTGCATGAATGTCTCCAGCCAAGGGGAGGGGGCGGCGGTGCTGCTGCGCTCGCTGGAGCCTCTGAGCGGCCAGGATGTCATGAGGGGCCTGCGAGCAGCCAAACGCAAAGCGGGAGCCAGAATCCTTAAGGAGAAAGAGCTCTGCAATGGTCCGTCCAAGCTGTGCCAAGCACTAGATATACAGCGCTGCTTCGACCGCAGGGATCTGGCCACCGATAGCGAGGTGTGGCTCGAGGGAGACCCAGAAGCAGAGACCGCTAGCGCTGGAGAGGTGGTGTCGACGTCCCGGATAGGGGTCGAGTCTCACGGCGAATGGGCGACCAAACCGCTTCGTTTCTACATGAGAGGACACCCGTGTGTGAGCGTGTTAAACAGAGATGCAGAGCGCCAGATGCAGTCCTCCACCGATCTTCAAATCGCCGAGACGGACGGCACGGTCTGATGAAATGTTGTTGGGTGATGAGGTCACCCTTTTAAAGGATTGTTTTATCAAAAAGGGATCATTTATTTACCATTGTGTCGCTTTGAATCTGTGGTTATTCCGTTTAACACCAAAGGAGATGTGTAGGagaatgtccaagctgctcttttccatataaTACAAGTGAAGTTTAAGTCATTATTCGGCAATAATAGTCTCATCTTTCTCGTAAAGCCTTCCAAATGAGAAGAATGTAGCACATCTGCATTCTGTGCTCGTTTGGTCAATTTGGAGCTTGAAAGCCCCTGGTGACTAATCGTTTTCACTGTAGAGAACAAAAAAGAGCAGCAAAAAATTACCGGAAGAGAATCACAAAGGGGTGGAACGACATAAGAGTGGGTAAATAAtgagaattgtaatttttgagtCAACTAACCTTTCGAGTTTTGTaagagcatgtttttttttttattgcatattctTGTTATTCCTGGTGCTTATTGATTTTACAGATGTTTGGAAAATCATTTGCACTTCGAGGCAATTACAACCCCcttttctcgttctctgtttcTCCACACTTAATCTTCATGGCACGCAATG

Function

GO:

id name namespace
GO:0006284 base-excision repair biological_process
GO:0003905 alkylbase DNA N-glycosylase activity molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
K03652 MPG; DNA-3-methyladenine glycosylase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27582 lncRNA upstream 152117 9602642 ~ 9603064 (+) True G18470
TU27569 lncRNA upstream 179279 9574881 ~ 9575902 (+) True G18458
TU27568 lncRNA upstream 179279 9575241 ~ 9575902 (+) False G18458
TU27567 lncRNA upstream 179487 9575241 ~ 9575694 (+) False G18458
TU27566 lncRNA upstream 180692 9574289 ~ 9574489 (+) True G18457
TU27622 lncRNA downstream 14136 9775320 ~ 9784458 (+) True G18502
TU27627 lncRNA downstream 93419 9854603 ~ 9859173 (+) True G18507
TU27641 lncRNA downstream 104602 9865786 ~ 9943153 (+) True G18517
TU27691 lncRNA downstream 149773 9910957 ~ 9911612 (+) True G18549
TU27728 lncRNA downstream 272957 10034141 ~ 10103461 (+) False G18574
XM_043233977.1 mRNA upstream 57266 9692949 ~ 9697915 (+) True aanat2
XM_043235157.1 mRNA upstream 62544 9679898 ~ 9692637 (+) True mgrn1b
XM_043235156.1 mRNA upstream 62544 9679898 ~ 9692637 (+) False mgrn1b
XM_043235155.1 mRNA upstream 65473 9679898 ~ 9689708 (+) False mgrn1b
XM_043235722.1 mRNA upstream 82377 9667567 ~ 9672804 (+) True LOC122341977
XM_043235569.1 mRNA downstream 17308 9778492 ~ 9779290 (+) True hbaa2
XM_043235166.1 mRNA downstream 24098 9785282 ~ 9786123 (+) True LOC122341659
XM_043229144.1 mRNA downstream 28171 9789355 ~ 9790164 (+) True hbbe1.1
XM_043228471.1 mRNA downstream 31472 9792656 ~ 9793389 (+) True hbbe1.2
XM_043228772.1 mRNA downstream 34605 9795789 ~ 9796532 (+) True LOC122331228
TU27611 other upstream 5301 9739796 ~ 9749880 (+) True G18491
TU27599 other upstream 58622 9694632 ~ 9696559 (+) False aanat2
TU27323 other upstream 569521 9184528 ~ 9185660 (+) False LOC122341719
TU27325 other upstream 569600 9184528 ~ 9185581 (+) False LOC122341719
TU26907 other upstream 1191805 8260084 ~ 8563376 (+) False LOC122342110
TU27625 other downstream 37631 9798815 ~ 9799755 (+) True hbbe1.3
TU27725 other downstream 264634 10025818 ~ 10034467 (+) True G18574
TU28036 other downstream 991575 10752759 ~ 10781853 (+) False kcna7
TU28033 other downstream 1017622 10778806 ~ 10781853 (+) False kcna7
XR_006250543.1 other downstream 1401170 11162354 ~ 11162443 (+) True LOC122342197

Expression Profile