RNA id: XM_043235245.1


Basic Information

Item Value
RNA id XM_043235245.1
length 1710
RNA type mRNA
GC content 0.45
exon number 11
gene id mettl22
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9964451 ~ 9974561 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAAGTCTCGTAAGCTGCGATATAACCTTTCTTGGAGGTATCTTGTCATATCGTTGCGCTCTTATTTTAGTATGATTTAATACTCTTGGTCTAcactacataaaaaatatgtaaactcAGATAGTCGGTAAATATTGTCAGCTCTTTGCCCCAAAGCTGATTACTACTACGAGACTGCGAGGTACGAAGATACTGCAGACTAGAGTGTGTAGGTCTAGTGAGCTGCTTACCTATACGAGCTGCGTCCTTGATAGAGTGCCATGCAGACTTGGCCATGGACCAGGTCACATTTAGAAGTGACACTGTTCTGTCTGATGTGCACCTGCTGACACCAAACTCTTGCCATCTCATGAAGAGACTAAACAGCGTAGGACAGCCAGTCTTCACTTCGAAGTTCAGGATTCTGCGGGACTCCAATGGGAAGGACTCGAGCAGCCTGTCTCCTGTCCGTGAGAGCACAGACGCGTCGATTGTCCCTCGGGATGAAGATGGGGACCTGGATGTGGTCAGGAGGCCCAGAAACAGCAGCTGTAACAGGAATGCAGTATGTCCCATTATCCTAAGCCAATCCACGGCAACCCTGACCGACGAGGAGGATGATTCTGAGGAGGAGGATGGTGCCCGTGAAATCATTAAGATCGAGCATACTATGGCGACGCCTCTGGAGGATGTAGGGAAGCAGATCTGGCGTGGTGCTTTCCTATTGGCCGATTTCATCCTGGCACGAGCAAACATGTTCAAAGGCGCCACTGTCCTTGAGCTTGGAGCTGGAACAGGACTAACCAGTATTGTCGTGGCAATGGTGGCCAAAACGGTGTACTGCACAGaTGTTGGTGACGACCTTCTGAGCATGTGTCAGAGAAATGTGACTCTGAACAAGCAGCACTTTGAACCCCAAGAAAGCGAAATAAGAGTGCGTCAGCTGGACTGGATGGCAGACGAATTGTGCACAGACGCTGATTTGGAGTTCTGCTGGACTGACGCAGAAATAGCCGACTTACACGATAATACCACTTTTGTGATCGCCGCAGATGTGTGTTATGACGACGATCTTACGGATGCTCTGTTCAGAACGTTATACAGACTTGCGAGCAACATGCGGCACCCCAGCACAACCTACATCTCCATAGAAAAGAGATTCAACTTCACGCTAAGACACATGGACGTGTCCTGCGAAGCTTATGATCACTTCCGCCACTGCCTAGACCAGTTACAGCAGATGACAGATGGGAAGATGAATTTCACGGTAGAGCCCGTGAAGAGCTCCTTTCCTCAGTTCTTGCAGTATGAAAGAGTGGAACAGCTGGAACTTTGGAAGGTGACGGCAGAAAGACTGTAACAAGTAGCGCCGAAGGTTTTTATGTTACCCCGTAACACCAGGATTTATAATATTTGCAGAAAcaatcttgttttatttaaatataagtccttagtttgattttaagttagcttgaaatgtatttattaaaggctTTGATTTCGCTTTTTCGTTGAAAATTGGTTCTAATGTATGTTTTGCTGTGACCTGCTTGAATTGTTAGcgtcagaatttttttaaaggatcatTGGGAGAGGCTTCGAATAAAGACTATCGACGTTTTACGAAAATTTGGGGTAGTATATTATTACCTGCCTAAGAGCATGCATTACTAGACCTGTAGATCTTTGAGgatctgtgtgttttcattaaatgaattatgCTTGAGCTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27812 lncRNA downstream 55834 9901531 ~ 9908617 (-) True G18638
TU27806 lncRNA downstream 171266 9789616 ~ 9793185 (-) True G18634
TU27798 lncRNA downstream 178327 9785249 ~ 9786124 (-) False G18628
TU27859 lncRNA upstream 19290 9993833 ~ 10039939 (-) False rbfox1
TU27935 lncRNA upstream 427290 10401833 ~ 10402211 (-) True G18717
TU27965 lncRNA upstream 599624 10574167 ~ 10579140 (-) True G18745
TU27991 lncRNA upstream 702914 10677457 ~ 10678580 (-) True G18771
TU28025 lncRNA upstream 714621 10689164 ~ 10697539 (-) True G18795
XM_043235242.1 mRNA downstream 1323 9941285 ~ 9963128 (-) True abat
XM_043234888.1 mRNA downstream 47382 9909976 ~ 9917069 (-) False prkcsh
XM_043234887.1 mRNA downstream 47476 9909976 ~ 9916975 (-) True prkcsh
XM_043233841.1 mRNA downstream 85874 9833670 ~ 9878577 (-) False LOC122338283
XM_043235256.1 mRNA upstream 19295 9993838 ~ 10210616 (-) False rbfox1
XM_043235260.1 mRNA upstream 19295 9993838 ~ 10210614 (-) False rbfox1
XM_043235261.1 mRNA upstream 19295 9993838 ~ 10133622 (-) True rbfox1
XM_043235255.1 mRNA upstream 19295 9993838 ~ 10106427 (-) False rbfox1
XM_043235254.1 mRNA upstream 19295 9993838 ~ 10106426 (-) False rbfox1
TU27537 other downstream 501546 9426572 ~ 9462905 (-) True G18433
TU27085 other downstream 1565623 8309552 ~ 8398828 (-) True fmc1
TU27088 other downstream 1653102 8309552 ~ 8311349 (-) False fmc1
XR_006250544.1 other downstream 1745396 8218902 ~ 8219055 (-) True LOC122342198
TU27061 other downstream 1755358 8207764 ~ 8209093 (-) False LOC122339740
XR_006250486.1 other upstream 419771 10394314 ~ 10396341 (-) True eef2kmt
XR_006250541.1 other upstream 804558 10779101 ~ 10779235 (-) True LOC122342195
XR_006250542.1 other upstream 805559 10780102 ~ 10780196 (-) True LOC122342196
XR_006248663.1 other upstream 1037393 11011936 ~ 11064583 (-) False lrrc4ba
XR_006250462.1 other upstream 1719729 11694272 ~ 11714719 (-) False map3k3

Expression Profile