RNA id: XM_043235249.1


Basic Information

Item Value
RNA id XM_043235249.1
length 2803
RNA type mRNA
GC content 0.40
exon number 7
gene id nat15
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9920575 ~ 9927011 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGATTCTGCATGTAGCCGTTAGCATGTAAACAAGTAAAGGAAACGCGACTGACAGATTAATTACTTTAATGCACTGCCTTCCCACTTCGTGTTATTGGAGATTTAAATcttcttattatatttttttagttgacTCTGAAATTCACATATGAGTTCTGACAGGCAGGAATGCTAACTAACGTTAGCTTCTAGCTTGTGAGATTATGAAGTTGTCGTTagttttgccttttttcttgGTGCGAGTTATTAAAAATTACTCAACAGCGAGTCTTCTGTGAGTGAAAATTAATCACATTTCATCTGGGTTACTGCAACTGACCCATTTGTATATGTCAATATGATATTGCGTGGTAtttgtttaatagtttttttcacttattatggcaaaaatgttttctgtttactTCAACATTGTGTACTATGTTCTGCTTTTCTTTACAAAAGACAGCATTTGAGTCGACGGTAAACTCTGAAGCAGCATACTTGCGCTTATCATATTTCTCCTCAGAGCGACTGCTTCGCTTGTAGTGAGATGATGACAAACAAGTAGCTGAAAGCTTTTGAAAGCAAGTTATTGGGCACGGTTTTGACACACACTGACCGCAGCGTCCCAGTCCATCAATCTCGCAGCACGTGTGAATGACCGACGTGGTGCCTACCACCGCCCTCAGTGAAATAAAGCTCCGCCTCCTCTGCCACGATGAcatagagagaataaaagtgctTTGTGGAGAGTGGTTTCCCATCGAGTATCCAGACTCATGGTACCATGACATCACATCAAATAAGAAGTTCTTCTCTCTGGCTGCCACCTTCAGAGGTGGAATCGTCGGGATGATTGTGGCGGAAATAAAAAGTAGAACGAAAGTGCACAAAGAGGATGGAGACATATTGGCTTCCAGTTTTCCTGTTGACACTCAAGTTGCTTACATCCTGAGTTTAGGGGTCGTGAAGGAGTTTCGAAAACACGGAATAGGCTCTCTGTTACTAGACAGTCTGAAGGAGCACATCTCCACCACGGCGCAGGACCATTGTAAAGCCATCTACCTGCATGTGCTCACCACCAACAACACTGCCATTCACTTCTATGAGAACAGAGACTTTAAACAGCACCACTATTTACCGTATTATTACTCGATACGAGGAGTGCTGAAGGATGGCTTCACCTATGTCCTCTACATCAATGGCGGACATCCTCCTTGGACTATCTTTGATTACATTCATCATATAGGTTCGGCACTGGCCAGTCTGAGCCCCTGCTCAATTCCTCAGAGAATTTACCGGCAAGCACAGAATCTGCTGCGCAGTTTCCTGCCGTGGTCGGGCATCTCCTCCAAGAGCGGCATTGAGTACAGCAGAACTATGTGAAGGTCATCGGGTCACAGTGCAGGGTGGATGAGATTTTGGGTCACATCAGTTGCAGAGGAGGACTGTGAAGACTGACATCGGATCTCTCTGGTCTCGAGCTGTGTACTATActtgtatattttacatgtatatatctatatatacttCAATTAATATATGCCTAGTCATTAGTGGATTGCCCTCTTAATATAAACTCTCCACTTCATGCCTGTAATTCTGCTGCTGTGTAGAAATATTCTATTGTTTATCcagatttttaatataaatagatttttttatttgtgcctGTCCTATATAGACGATTTTAGGGTTTGATGGTAGAGgtatgcatacttttttttttttttcaatttagtcACTTTCATGCATGTGTCaagcactttttctttttttttgcgcaGGAACACCTTGACACTAAGCATATATTTTAACCCCCCCGGTTTTAAGTTAAAgatgtttttgggtttttttaaataacgtttTTCACAGAGGAAATGAATGTAGCGTTGCTACGAAGGGAAAACGACGCCGTTGCAGACAGCCCCCCTCCTCTTCTCGTCAAACGCAAATGTGAAGACTCTTTAAATTCAGCTTGGGTTTCGGCATGTTGCTGTGAATCAGGgatttacacacaaaataaaaacgtgtTTAAAAATAGACCGCTCCTGCATCACGTGACTTGCAAtatcagaaatgttatttatctGTGTTTGACCAATCCGTCCGTTCACCGCGTCTTTGAAGCacgctgggtttttttttttttggcagtatgCGTTTACATTTCTGTAAGATCACCCAAGACACCTTACAGAAACCGCTCCGTCGTACGTGATTGGCCTTCACGTGTTTGGAAATTTTGTGTCTTTCGTTTCTGGAtctgtaaaaacacttttttttttttttttggtgacagAATTGCATGTATGAACAGCTGATTTTGAACGGGTTATCAGTATGTGTAATAGAACCGCTATCACCTTGTGCTTTGGGGTTTGAGATTGTGTGTAAATCTCCTACAAGTTATCATCCAGTCTGTTTTAACGTCACGCGCTTGTGAACCGGTACGTTGCTGTGTTTTTACGTTTCATCGTGTTTAATGCGTAGAGCAAGTGTTTTAAGCTCTCGCAGTCGAAGAAAATACATCCTGAAGCGACAGTGGTTGAGATGCGGGTGAAGAGGAACTGAAATGTTTGATTTGTGAAGTACCCTCTAGTGTTCACCGAGAGGAGCGTAGACTAGAgggatttattatttttttattttaactgttcataaatgaattttatttgttgtactgcTCTTGTCCGTTCGCATCCCTCCATGTGTCCGTTATTCTTCCTTTatgaattaaacattcattcgtgcattaaaataaatttgagaTTACCTACAGGTGAaagagatataaataaataaatacataaagccAAAA

Function

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0043967 histone H4 acetylation biological_process
GO:0007059 chromosome segregation biological_process
GO:0008283 cell population proliferation biological_process
GO:0017196 N-terminal peptidyl-methionine acetylation biological_process
GO:0000139 Golgi membrane cellular_component
GO:0004596 peptide alpha-N-acetyltransferase activity molecular_function
GO:0010485 H4 histone acetyltransferase activity molecular_function

KEGG:

id description
K21121 NAA60; N-alpha-acetyltransferase 60

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27691 lncRNA upstream 9192 9910957 ~ 9911612 (+) True G18549
TU27627 lncRNA upstream 61631 9854603 ~ 9859173 (+) True G18507
TU27622 lncRNA upstream 136346 9775320 ~ 9784458 (+) True G18502
TU27582 lncRNA upstream 317740 9602642 ~ 9603064 (+) True G18470
TU27568 lncRNA upstream 344902 9575241 ~ 9575902 (+) False G18458
TU27728 lncRNA downstream 107130 10034141 ~ 10103461 (+) False G18574
TU27867 lncRNA downstream 346963 10273974 ~ 10302050 (+) True G18671
TU27964 lncRNA downstream 644808 10571819 ~ 10579144 (+) True G18744
TU27967 lncRNA downstream 662511 10589522 ~ 10589819 (+) True G18747
TU27977 lncRNA downstream 712078 10639089 ~ 10639293 (+) True G18757
XM_043234893.1 mRNA upstream 12229 9892534 ~ 9908575 (+) False elavl3
XM_043235251.1 mRNA downstream 101 9927112 ~ 9941228 (+) True carhsp1
XM_043235480.1 mRNA downstream 48361 9975372 ~ 9982638 (+) True LOC122341833
XM_043233707.1 mRNA downstream 315499 10242510 ~ 10296401 (+) True sept12
XM_043233708.1 mRNA downstream 341189 10268200 ~ 10296401 (+) False sept12
XM_043233711.1 mRNA downstream 341220 10268231 ~ 10296401 (+) False sept12
TU27625 other upstream 121049 9798815 ~ 9799755 (+) True hbbe1.3
TU27611 other upstream 170924 9739796 ~ 9749880 (+) True G18491
TU27599 other upstream 224245 9694632 ~ 9696559 (+) False aanat2
TU27323 other upstream 735144 9184528 ~ 9185660 (+) False LOC122341719
TU27725 other downstream 98807 10025818 ~ 10034467 (+) True G18574
TU28036 other downstream 825748 10752759 ~ 10781853 (+) False kcna7
TU28033 other downstream 851795 10778806 ~ 10781853 (+) False kcna7
XR_006250543.1 other downstream 1235343 11162354 ~ 11162443 (+) True LOC122342197
TU28257 other downstream 1406748 11333759 ~ 11335825 (+) True LOC122331261

Expression Profile