Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043235304.1 |
| length | 835 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | LOC122341728 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 10397843 ~ 10401045 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0048741 | skeletal muscle fiber development | biological_process |
| GO:0090303 | positive regulation of wound healing | biological_process |
| GO:0002040 | sprouting angiogenesis | biological_process |
| GO:0050769 | positive regulation of neurogenesis | biological_process |
| GO:0030246 | carbohydrate binding | molecular_function |
| GO:0016936 | galactoside binding | molecular_function |
| GO:0043236 | laminin binding | molecular_function |
| id | description |
|---|---|
| K06830 | LGALS1; galectin-1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU27867 | lncRNA | upstream | 95793 | 10273974 ~ 10302050 (+) | True | G18671 |
| TU27728 | lncRNA | upstream | 294382 | 10034141 ~ 10103461 (+) | False | G18574 |
| TU27641 | lncRNA | upstream | 454690 | 9865786 ~ 9943153 (+) | True | G18517 |
| TU27691 | lncRNA | upstream | 486231 | 9910957 ~ 9911612 (+) | True | G18549 |
| TU27627 | lncRNA | upstream | 538670 | 9854603 ~ 9859173 (+) | True | G18507 |
| TU27964 | lncRNA | downstream | 170774 | 10571819 ~ 10579144 (+) | True | G18744 |
| TU27967 | lncRNA | downstream | 188477 | 10589522 ~ 10589819 (+) | True | G18747 |
| TU27977 | lncRNA | downstream | 238044 | 10639089 ~ 10639293 (+) | True | G18757 |
| TU27983 | lncRNA | downstream | 262201 | 10663246 ~ 10664532 (+) | True | G18763 |
| TU28016 | lncRNA | downstream | 290845 | 10691890 ~ 10693750 (+) | False | LOC122333995 |
| XM_043235302.1 | mRNA | upstream | 3499 | 10390510 ~ 10394344 (+) | True | alg1 |
| XM_043235937.1 | mRNA | upstream | 12200 | 10374102 ~ 10385643 (+) | True | flr |
| XM_043235938.1 | mRNA | upstream | 12202 | 10374102 ~ 10385641 (+) | False | flr |
| XM_043233708.1 | mRNA | upstream | 101442 | 10268200 ~ 10296401 (+) | False | sept12 |
| XM_043235654.1 | mRNA | downstream | 21701 | 10422746 ~ 10571227 (+) | True | cacna1ia |
| XM_043234873.1 | mRNA | downstream | 194599 | 10595644 ~ 10607509 (+) | True | grap2a |
| XM_043234869.1 | mRNA | downstream | 206591 | 10607636 ~ 10617581 (+) | True | fam83fa |
| XM_043235677.1 | mRNA | downstream | 225117 | 10626162 ~ 10638596 (+) | True | rac2 |
| XM_043228158.1 | mRNA | downstream | 244859 | 10645904 ~ 10661084 (+) | True | sstr3 |
| TU27725 | other | upstream | 363376 | 10025818 ~ 10034467 (+) | True | G18574 |
| TU27625 | other | upstream | 598088 | 9798815 ~ 9799755 (+) | True | hbbe1.3 |
| TU27611 | other | upstream | 647963 | 9739796 ~ 9749880 (+) | True | G18491 |
| TU27599 | other | upstream | 701284 | 9694632 ~ 9696559 (+) | False | aanat2 |
| TU27325 | other | upstream | 1212262 | 9184528 ~ 9185581 (+) | False | LOC122341719 |
| TU28036 | other | downstream | 351714 | 10752759 ~ 10781853 (+) | False | kcna7 |
| TU28033 | other | downstream | 377761 | 10778806 ~ 10781853 (+) | False | kcna7 |
| XR_006250543.1 | other | downstream | 761309 | 11162354 ~ 11162443 (+) | True | LOC122342197 |
| TU28257 | other | downstream | 932714 | 11333759 ~ 11335825 (+) | True | LOC122331261 |
| TU28236 | other | downstream | 967848 | 11368893 ~ 11369752 (+) | True | G18949 |
