RNA id: XM_043235363.1


Basic Information

Item Value
RNA id XM_043235363.1
length 1683
RNA type mRNA
GC content 0.49
exon number 3
gene id dnajb1a
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6665977 ~ 6670009 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCGCCGAGCAAGTCATTTTTCTCGGACTTTCTGCGGACGCTCGGCGACGTTGACAATTACATTACGGCGCTTTTCGCCGGGAACTCTTCGCGATATCGAAGTTTTACATCGATTAAAGTTAGAGGAGCCTCGGGAAAATGGTCGCACGTTTCAGGGACGCGGCAGTGGCTGAACGCGATCTGTGAGGATTTGGATGAATAACTTAAAAACAGTTTGTTAAACTCCATCCGCGCGCTTCATGTTCGACAGGACAGGAGGAGGATCGTTTAAAATTAATCGAGTCGTTCAGTATTTGGAGGATATCGACATATGGAAACGGGTAGTTGAACGACAGCTAGTCGAGTGTTGTGATGGGTAAAGATTATTACAGGATCCTGGGGATAGAGAAGGGCGCCTCGGATGAGGAGATCAAGAAAGCCTacagaaaacaagctttaaGGTTTCATCCCGACAAAAACAAATCGGCCGGAGCAGAGGATAAATTCAAAGAAATCGCCGAAGCTTACGATGTCCTGAGCGATGCCAAGAAGAAAGACATCTATGACAGATGTGGAGAGGATGGGCTCAAGGGACACGCCGGGGGTGGCTGCAATGGCCCTAGCTATACTTTTCACGGCGATCCTCACGCCATGTTTGCGGAGTTCTTCGCCGGCCGCAGCCCGTTCGATCAGTTTTTTGCGTCCGCCGGGGGCGCCGACGATGACATGGACATCGACGACCCCTTCGCGGCGTTCGGGATGGGAGGGATGGGCGGCTTTCCCAGGTCTTTCAAGTCTCGGGTGGGAGGCGTGCACGGGGGccgagaaaagaagaaagatccCCCGGTAGTGCACGAGCTCAAGGTGAGCCTGGAAGAGGTGTTCTCTGGTTGCACGAAAAAGATGAAGATCTCTCGCAAGAGGCTGAACCCGGACCGCTGCTCGGTGCGCACCGAAGACAAGATCCTCACTGTGGACATCAAACGAGGCTGGAAGGAGGGCACCAAGATTACCTTTCCCAAAGAGGGAGATGAGACGCCAACCAACATCCCTGCCGATATAGTATTTGTGGTTAAGGACAAGATTCACCCGGTTTTTAAGCGAGACGGCTCTGACATCATCTACCCTGCAAGGATATCCCTCCGAGAGGCTCTATGCGGCTGCACCATCAGCGCTCCCACCCTGGACGGTAGAACTGTCACCGTGACATCCCGTGATGTCATCAAACCCGGTATGAAGAAGAGGATAGTGGGAGAAGGACTGCCGCTGTCCAAATGTCCTGAAAAGAGAGGAGACATGGTGCTAGAGTTCTTGGTGAAATTTCCGGACAAGTTGGGACAGAGTGCTCGTGAATCTCTGGTTCAGATCCTACCACCTTGACTCTCAACACACAGATCCTATGATTGGGGCccttctgatttttttttttttagatctcaTTACACCTGAAAGCATCAGTGGTGAATACACAAAAGTCAAGCTCAGAGAAACGCGACAGAGCTCCCGACAGTTTATTTATACCCCCTTTACTTATATCGCAATGCACTTTTACAAAACACTGTGAAACCTCTCAGAAATAATATATTGACTTTCACACACCGTTTTTAAAGTACCTCCAAGTAAATGCTCCTTTTTGCTTCTTCGGGTTTCTTTCTCCTCTAATCTGttgatattttcttttattaaaataatattcccATTTTA

Function

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09511 DNAJB5; DnaJ homolog subfamily B member 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU26329 lncRNA upstream 40681 6623688 ~ 6625296 (+) True G17630
TU26258 lncRNA upstream 190358 6475099 ~ 6475619 (+) True G17584
TU26226 lncRNA upstream 229009 6436732 ~ 6436968 (+) True G17560
TU26186 lncRNA upstream 247614 6417662 ~ 6418363 (+) True G17524
TU26190 lncRNA upstream 312152 6346536 ~ 6353825 (+) True G17528
TU26379 lncRNA downstream 34405 6704414 ~ 6704702 (+) True G17662
TU26380 lncRNA downstream 35186 6705195 ~ 6705405 (+) True G17663
TU26412 lncRNA downstream 176929 6846938 ~ 6847606 (+) True G17683
TU26442 lncRNA downstream 232737 6902746 ~ 6903161 (+) True G17699
TU26448 lncRNA downstream 252187 6922196 ~ 6976265 (+) True G17704
XM_043235360.1 mRNA upstream 9361 6649673 ~ 6656616 (+) True samd1a
XM_043235358.1 mRNA upstream 19076 6630997 ~ 6646901 (+) True prkacaa
XM_043235357.1 mRNA upstream 19076 6635960 ~ 6646901 (+) False prkacaa
XM_043235356.1 mRNA upstream 19076 6638195 ~ 6646901 (+) False prkacaa
XM_043235364.1 mRNA upstream 35540 6626367 ~ 6630437 (+) True asf1ba
XM_043233643.1 mRNA downstream 190 6670199 ~ 6678717 (+) True gipc1
XM_043233644.1 mRNA downstream 190 6670199 ~ 6678717 (+) False gipc1
XM_043233639.1 mRNA downstream 9172 6679181 ~ 6684198 (+) True trim35-12
XM_043234964.1 mRNA downstream 126777 6796786 ~ 6833224 (+) True dnm2a
XM_043234966.1 mRNA downstream 171010 6841019 ~ 6846641 (+) True tnfsf14
TU26266 other upstream 109227 6504915 ~ 6556750 (+) False G17590
TU26270 other upstream 109227 6504915 ~ 6556750 (+) True G17590
TU26037 other upstream 470955 6192740 ~ 6195022 (+) False LOC122341437
XR_006250506.1 other downstream 986023 7656032 ~ 7725519 (+) False baiap2a
unassigned_transcript_276 other downstream 1279752 7949761 ~ 7950417 (+) True LOC122331768
TU26829 other downstream 1279795 7949804 ~ 7950310 (+) False LOC122331768
TU26831 other downstream 1280845 7950854 ~ 7951364 (+) True G17985
TU26833 other downstream 1290062 7960071 ~ 7962295 (+) False LOC122341279

Expression Profile