RNA id: XM_043235514.1


Basic Information

Item Value
RNA id XM_043235514.1
length 2524
RNA type mRNA
GC content 0.47
exon number 11
gene id il2rb
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 23696193 ~ 23705438 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGACAGATGGAGGTAGAAGGGgaggggcagagagagagagaacgagagcgGTAAagggaggaggatgaagagttGGGGGTCAggtagacagagagacagacctCAGCATCCATGGTGCCTGCGCAGAAAGCTGTAAGTGAAGGacATTGTTCAAAACATCATCTTCCTCATGGGCAGCGCACCGATTTAAAGGGCTGTTACTCTTCGGGCGTCCCGAGTTTGAGTCCCGGCTTGCGGACCTCTCCCGACCCTTCGCTCTTTACTTGCCGTCTAATAACTGTCGAATCATAATAAAGCAAAGATGCCTTTTTGAAAAAGGTCTAAAAGAAAATCGTACAGGTCTGGGACAGTATGAGAATACGGAAGCCTGTTCAGAACGGAGAGATGCGTAAACTGTAAATTGTGAGCTGTAAAACAAATTCGTATTGCGAGAAACTAATTGTGCACGTCTCAGTTGTAAAATATAAACCCAGAACTGCCAGGATTGCCTTCGGAATAGGCTTTCatatgaagATCCAAGAAGTGATGAAGGGTCAATGGCATACTTCTTTCTTCACCTTGATCATATTTTATGGAACCGGCCAGTCCAGAAATACGCAAACAGAAGGTCTGGCCTGTGTGAGCGATTATGTGACCGACATTTCTTGTGTGTGGTGGAACTCGACATTTTCGTCTGACCAGCGATGCGTGCTTGGGGGGAAATGTGACATAAAAAGATGTGTTTCTAGATCCTGTGAACTGCTGCCACTGAGCAATCAATCACCTTCTAGGAGAAGCTGTTCTTTAAGCTTTGACAAACATCACTTTTTTTTCGTCAATAAGTTCTGGTTGAATGTAACCTGTAATGGATCTGTCGTCACTAAAATACATTATCAGCCTAGCCGACACATTAAGACCCAACCCCCAGATATGCCCACTGTAAGTGAGGACAGAATAACTTGGAGTAAAGGCAGTAACTTTCCAGAAGCCATAAAATCTTATGAATTTCAGCTGCAGGTTAAAGCCTTACATACAAGCTGGGAGACAGCAACACTTAGGAATTGCTCTCAGGAAAATGACGTGCAGCTGGACCATAATAAACTGACTGTGGGAGAGGTGTACCAGGCCAGGGTACGTGTGAAGCCCGTTGAGCCCTTGGATCATGGTTATTTTCGTGGGGAATGGAGCGACTGGAGTCCTACTGTGTCCTGGAGATCTGAGATTGGAAAGCCACCGATGAAACCAAGATATGATGTATCTCCATCAGtgCCTGATGATATTCGTATTGTTCTGATCATTGGAAGCCTCATCTTGCTTGTTCTTACTTCTCTTTGTTTGGTCATCTGTAAACTAAAGAAAAGCAAACGGTCAATAAAACCAAACAATCAGCATGTTCCCGACCCCTCCAAATATTTCCAGCCTCTTCACACCGTTCACGGTGGAAACTTCCGGAAATGGCTGGGCTGTCAGAATTCTGTTGGGCCTTTTCTTACCCTTCAGTCGTGTGACGATATCTCACCTGTAGAGGTCAGCAATTTTTGGGACGTGTCCTTGATGGATCCCGCCGCTCAGATGTCTGCTGCAGTGTTCAATCAGGTGGACTCTGGGCTGGAGAACAGCGGCACTAGTCACGCGTCCTCATCCGTTTTCTCTAACATGGGTTACTTCTACAGCAAATCCAACAGAGGCTCTCTTTATCTCGAATCCTGCCCCGTGTACTTCAGCTACCACCCCGAGGAAGCCACGAGCTCCACTGCGTCCTCACCCGGGTCTTCTTACGACTGTTTGCAAACCCCAAGTTACCAGACGGATCAGCCCGTGAGCCCGGATTCGGGGTTCGGCATGGCCGGAGAGGAGCTCTGTGAGGACGAGCAGGAAGATGAAGATTGGAGGGACGCCGAGACGTGTGCGGTGGAAGGACAGGCGCTGATCTCCTTCATCATGTCGCTGTCGCAGGGTTCCCACAGTGCTGTTCGCCGGCCGGAGAGTTTGTCTCCGGTGGCCGTCAGCACGCCGCTGTCTGAACCTGCGAGAGCGAGCGGCGGCGCGTCCGGCTCGGAGCCGGCAGAGGCCGCCGTGgtcagagcctcctccatgatCGAGCCCTGCGGAAGCGGCTACCTGACCCTGAAGGAGATGCAGAAATACAGCAACAAATCCATCTGAACGCAGGCCTGCTCTGTCTCTGTATGTGTAGGGGAAAACAACCCAGGTTTATCTTTGAAAGTCAGTTTCTATAGTAGCAGAATAgaaatgtttggggtcaataatccttttaatgttttcaaaagaagtctcttatgctcacaatgctctgcatttgtttgattgaAAAATACTGTACACATAGAAGTAttgtggaatattttttttagaatttaaaagagctgttttgttttttattttaatatattttaaaatgtattcctgcTATGGActtttttagcagccattactccagtcttcagtgtcacatgatcctttagaaacaTTTTCCGTGTTATCAGTattgctgcttgatatttttgtggaaaccatgctACAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33837 lncRNA upstream 23206 23667905 ~ 23672990 (+) True G22800
TU33792 lncRNA upstream 50030 23578476 ~ 23646166 (+) False G22758
TU33791 lncRNA upstream 74542 23578476 ~ 23621654 (+) True G22758
TU33788 lncRNA upstream 117955 23574898 ~ 23578241 (+) True G22757
TU33784 lncRNA upstream 132950 23563040 ~ 23563246 (+) True G22754
TU33845 lncRNA downstream 9788 23715226 ~ 23721719 (+) False c1qtnf6a
TU33840 lncRNA downstream 49084 23754522 ~ 23755997 (+) True G22802
TU33856 lncRNA downstream 53305 23758743 ~ 23759342 (+) True G22816
TU33879 lncRNA downstream 96738 23802176 ~ 23805489 (+) True G22833
TU33911 lncRNA downstream 165357 23870795 ~ 23871177 (+) True G22857
XM_043235476.1 mRNA upstream 8907 23684853 ~ 23687289 (+) True LOC122341829
XM_043235475.1 mRNA upstream 11485 23682485 ~ 23684711 (+) True mpst
XM_043230858.1 mRNA upstream 15184 23674032 ~ 23681012 (+) True si:ch211-256m1.8
XM_043230902.1 mRNA upstream 34851 23655511 ~ 23661345 (+) True napsa
XM_043235549.1 mRNA upstream 51656 23636361 ~ 23644540 (+) True st13
XM_043230466.1 mRNA downstream 4065 23709503 ~ 23716576 (+) True c1qtnf6a
XM_043234023.1 mRNA downstream 167693 23873131 ~ 23877674 (+) True mchr1b
XM_043234024.1 mRNA downstream 167694 23873132 ~ 23877674 (+) False mchr1b
XM_043235839.1 mRNA downstream 334464 24039902 ~ 24051913 (+) True LOC122342055
XM_043235831.1 mRNA downstream 346484 24051922 ~ 24056391 (+) True LOC122342045
XR_006250499.1 other upstream 287382 23403441 ~ 23408814 (+) True LOC122341907
TU33550 other upstream 532480 23158249 ~ 23163716 (+) False prr15la
TU33451 other upstream 789501 22905377 ~ 22906695 (+) False LOC122341356
TU33136 other upstream 1148988 22546158 ~ 22547208 (+) True G22329
TU33161 other upstream 1166136 22528989 ~ 22530060 (+) True G22344
unassigned_transcript_294 other downstream 130661 23836099 ~ 23836180 (+) True trnas-aga_1
TU34051 other downstream 344801 24050239 ~ 24051863 (+) False LOC122342055
TU34052 other downstream 345300 24050738 ~ 24051863 (+) False LOC122342055
TU34076 other downstream 389586 24095024 ~ 24097159 (+) True G22958
TU34141 other downstream 728617 24434055 ~ 24439463 (+) True G22996

Expression Profile