Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043235982.1 |
| length | 2504 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 1 |
| gene id | fzd2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 11603674 ~ 11606177 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0008406 | gonad development | biological_process |
| GO:0007199 | G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger | biological_process |
| GO:0007223 | Wnt signaling pathway, calcium modulating pathway | biological_process |
| GO:0003146 | heart jogging | biological_process |
| GO:0016477 | cell migration | biological_process |
| GO:0031018 | endocrine pancreas development | biological_process |
| GO:0070654 | sensory epithelium regeneration | biological_process |
| GO:0030855 | epithelial cell differentiation | biological_process |
| GO:0007409 | axonogenesis | biological_process |
| GO:0060027 | convergent extension involved in gastrulation | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0061341 | non-canonical Wnt signaling pathway involved in heart development | biological_process |
| GO:0001944 | vasculature development | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0032589 | neuron projection membrane | cellular_component |
| GO:0045177 | apical part of cell | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0030165 | PDZ domain binding | molecular_function |
| GO:0042813 | Wnt-activated receptor activity | molecular_function |
| GO:0017147 | Wnt-protein binding | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| id | description |
|---|---|
| K02235 | FZD2; frizzled 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28491 | lncRNA | upstream | 162336 | 11440506 ~ 11441338 (+) | True | G19126 |
| TU28487 | lncRNA | upstream | 166477 | 11436944 ~ 11437197 (+) | True | G19123 |
| TU28233 | lncRNA | upstream | 222884 | 11380273 ~ 11380790 (+) | True | G18946 |
| TU28274 | lncRNA | upstream | 228273 | 11371502 ~ 11375401 (+) | True | G18982 |
| TU28230 | lncRNA | upstream | 232729 | 11326598 ~ 11370945 (+) | False | G18945 |
| TU28582 | lncRNA | downstream | 106432 | 11712609 ~ 11719579 (+) | False | G19184 |
| TU28579 | lncRNA | downstream | 109554 | 11715731 ~ 11718772 (+) | True | G19184 |
| XR_006249757.1 | lncRNA | downstream | 228595 | 11834772 ~ 11835253 (+) | True | LOC122338225 |
| TU28625 | lncRNA | downstream | 285726 | 11891903 ~ 11893656 (+) | False | syt5a |
| TU28622 | lncRNA | downstream | 361471 | 11967648 ~ 11974006 (+) | True | G19208 |
| XM_043235659.1 | mRNA | upstream | 9506 | 11591600 ~ 11594168 (+) | True | ccdc43 |
| XM_043235460.1 | mRNA | upstream | 88515 | 11497653 ~ 11515159 (+) | True | LOC122341817 |
| XM_043235874.1 | mRNA | upstream | 190405 | 11408037 ~ 11413269 (+) | True | clec19a |
| XM_043228438.1 | mRNA | upstream | 236559 | 11362983 ~ 11367115 (+) | True | si:dkey-66i24.8 |
| XM_043228819.1 | mRNA | upstream | 257740 | 11344269 ~ 11345934 (+) | True | si:dkey-66i24.7 |
| XM_043235667.1 | mRNA | downstream | 10018 | 11616195 ~ 11629282 (+) | False | mylk5 |
| XM_043235666.1 | mRNA | downstream | 10019 | 11616196 ~ 11629282 (+) | True | mylk5 |
| XM_043234588.1 | mRNA | downstream | 34525 | 11640702 ~ 11645443 (+) | True | dcaf7 |
| XM_043234596.1 | mRNA | downstream | 34525 | 11640702 ~ 11645443 (+) | False | dcaf7 |
| XM_043235535.1 | mRNA | downstream | 134102 | 11740279 ~ 11749928 (+) | True | strada |
| TU28236 | other | upstream | 233922 | 11368893 ~ 11369752 (+) | True | G18949 |
| TU28257 | other | upstream | 267849 | 11333759 ~ 11335825 (+) | True | LOC122331261 |
| XR_006250543.1 | other | upstream | 441231 | 11162354 ~ 11162443 (+) | True | LOC122342197 |
| TU28036 | other | upstream | 821821 | 10752759 ~ 10781853 (+) | False | kcna7 |
| XR_006249731.1 | other | downstream | 167024 | 11773201 ~ 11833924 (+) | True | kcnc3a |
| XR_006249728.1 | other | downstream | 167024 | 11773201 ~ 11833924 (+) | False | kcnc3a |
| XR_006249729.1 | other | downstream | 167024 | 11773201 ~ 11833924 (+) | False | kcnc3a |
| TU28690 | other | downstream | 486426 | 12092603 ~ 12100852 (+) | True | LOC122342134 |
| XR_006249244.1 | other | downstream | 697187 | 12303364 ~ 12312990 (+) | False | nbr1b |
