RNA id: XR_006250524.1


Basic Information

Item Value
RNA id XR_006250524.1
length 812
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id LOC122342119
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 29923165 ~ 29924120 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGAATGAGGGTATAGAGGGCAATTTGGGATACAGCCATTGACAAGACAGGAAAAGTAACGAAAAGTGTGACACAACAGACAGAATcagattacaaaataaaagacatgacGACAATGAACAAGACAAGCCCAAACCCTTTGTTATaccatgtaaatattttctaaatatataataaatctttttagaatagatatacacagtataatgttcacaaataattttattttggatgcaatagTTAAAATGTATACACACCTTAAACAACTAATTCTCTTTTCATTTATCTGTGGGCCACTGAAGGTGGATGGTTTTGATTTCATCGCTGGGCTTCTGCTGACAGgtacaaaaaagaagaaatttaaaTACCTGCATGTACACGGGCATACAGCCAATGAAGCGCCTAGTGAAATGGAAGAATCTCATTCCGAACTCACTATAGAACTTTTAACTGAGTCCAGGCTTGCATTTATCaagaatcattctaataatatgtataattattgtgatttttctaTTGATGTACCATCtgaatttccttttttctgtaCAGATAATACATTGGAACAACTGTATCAattaatttactaattattttagTCTATATTCTGTCTGAAATACATTTCTGGACTCTTTAGTGCATCTCATCAAGGACCATTCACTTcgaatgcacttattgtgtcaTGCCCTTTGATAtctaatgtaattttttctctttcaacctaatatttctgtgtatgtATTAGAGAACGATGTATGCAATGCAATTCACTTTGCAttgagaatttaaaatgaataaatcagtatcttcta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248675.1 lncRNA upstream 866 29921535 ~ 29922299 (+) True LOC122333787
TU36461 lncRNA upstream 107518 29814619 ~ 29815647 (+) True G24464
XR_006248994.1 lncRNA upstream 176290 29726194 ~ 29746875 (+) True LOC122335675
TU36433 lncRNA upstream 421835 29500518 ~ 29501330 (+) True G24438
XR_006248987.1 lncRNA upstream 520562 29391928 ~ 29402603 (+) False LOC122335632
TU36561 lncRNA downstream 14303 29938423 ~ 29938813 (+) True G24546
XM_043234738.1 mRNA upstream 1674 29916253 ~ 29921491 (+) True LOC122341412
XM_043232684.1 mRNA upstream 138061 29773885 ~ 29785104 (+) False LOC122334671
XM_043232683.1 mRNA upstream 138061 29774160 ~ 29785104 (+) True LOC122334671
XM_043232685.1 mRNA upstream 138061 29774160 ~ 29785104 (+) False LOC122334671
XM_043232687.1 mRNA upstream 198058 29691307 ~ 29725107 (+) True LOC122334720
TU36431 other upstream 423046 29499523 ~ 29500119 (+) True G24436
TU36421 other upstream 480510 29439949 ~ 29442655 (+) False LOC122335508
TU36401 other upstream 521899 29391918 ~ 29401266 (+) False LOC122335632
TU36269 other upstream 692935 29228753 ~ 29230230 (+) False cenpx
TU36055 other upstream 1076873 28843841 ~ 28846292 (+) False LOC122335482

Expression Profile