RNA id: XR_006250544.1



Basic Information


Item Value
RNA id XR_006250544.1
length 154
RNA type snRNA
GC content 0.54
exon number 1
gene id LOC122342198
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8218902 ~ 8219055 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGCCTTAAACTGATGAGTAAGGAAAATAACGACGCGGGGTGACGCCTGTGTCCTCGCACGATCTCGCGAGAAGAATTTTTGAAAGGGCACAGGTCCGTCTGCGAGGTGACTCACCTACTTCGTGAGATGCCGAGCAGAACCAGGATCTGCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU27076 lncRNA downstream 6142 8211867 ~ 8212760 (-) False fam234b
TU27114 lncRNA downstream 7603 8158064 ~ 8211299 (-) True G18147
TU27064 lncRNA downstream 9809 8207698 ~ 8209093 (-) True LOC122339740
TU27062 lncRNA downstream 9809 8207764 ~ 8209093 (-) False LOC122339740
TU27063 lncRNA downstream 9809 8207764 ~ 8209093 (-) False LOC122339740
TU27072 lncRNA upstream 81359 8300414 ~ 8383611 (-) True G18129
TU27074 lncRNA upstream 81359 8300414 ~ 8383611 (-) False G18129
TU27122 lncRNA upstream 87669 8306724 ~ 8389631 (-) True G18155
TU27161 lncRNA upstream 95047 8314102 ~ 8317089 (-) True LOC122331391
XR_006248180.1 lncRNA upstream 95048 8314103 ~ 8315934 (-) False LOC122331391
XM_043229131.1 mRNA downstream 814 8211814 ~ 8218088 (-) False fam234b
XM_043229118.1 mRNA downstream 814 8211814 ~ 8218088 (-) False fam234b
XM_043229124.1 mRNA downstream 815 8211814 ~ 8218087 (-) False fam234b
XM_043229114.1 mRNA downstream 815 8211814 ~ 8218087 (-) False fam234b
XM_043233970.1 mRNA downstream 9875 8207785 ~ 8209027 (-) False LOC122339740
XM_043229350.1 mRNA upstream 15844 8234899 ~ 8257213 (-) True LOC122331822
XM_043234657.1 mRNA upstream 83016 8302071 ~ 8305993 (-) True LOC122341283
XM_043229074.1 mRNA upstream 90477 8309532 ~ 8311320 (-) False fmc1
XM_043225569.1 mRNA upstream 166009 8385064 ~ 8388690 (-) True LOC122329328
XM_043228534.1 mRNA upstream 279677 8498732 ~ 8502673 (-) True LOC122331080
TU27061 other downstream 9809 8207764 ~ 8209093 (-) False LOC122339740
XR_006248283.1 other downstream 204201 8011441 ~ 8014701 (-) True LOC122331739
XR_006248284.1 other downstream 204201 8011451 ~ 8014701 (-) False LOC122331739
TU27045 other downstream 277911 7934717 ~ 7940991 (-) False LOC122341278
TU26334 other downstream 1593606 6619253 ~ 6625296 (-) False crb3a
TU27085 other upstream 90497 8309552 ~ 8398828 (-) True fmc1
TU27088 other upstream 90497 8309552 ~ 8311349 (-) False fmc1
TU27537 other upstream 1207517 9426572 ~ 9462905 (-) True G18433
XR_006250486.1 other upstream 2175259 10394314 ~ 10396341 (-) True eef2kmt
XR_006250541.1 other upstream 2560046 10779101 ~ 10779235 (-) True LOC122342195

Expression Profile