RNA id: unassigned_transcript_286


Basic Information

Item Value
RNA id unassigned_transcript_286
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnat-cgu
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13913623 ~ 13913694 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGCGCGGTGGCCAAGTGGTAAGGCGTCGGTCTCGTAAACCGAAGATCGCGGGTTCGAACCCCGTCCGTGCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU29625 lncRNA upstream 95401 13815353 ~ 13818222 (+) True G19891
TU29624 lncRNA upstream 121068 13787833 ~ 13792555 (+) True G19890
TU29615 lncRNA upstream 208221 13698574 ~ 13705402 (+) False rbbp6
TU29485 lncRNA upstream 470045 13409739 ~ 13443578 (+) False G19788
TU29498 lncRNA upstream 471474 13441686 ~ 13442149 (+) True G19798
XR_006250533.1 lncRNA downstream 232 13913926 ~ 13920269 (+) True LOC122342149
TU29717 lncRNA downstream 26922 13940616 ~ 13943491 (+) True G19963
TU29750 lncRNA downstream 82776 13996470 ~ 13997081 (+) False slc16a3a
TU29788 lncRNA downstream 186479 14100173 ~ 14101904 (+) True G20009
TU29726 lncRNA downstream 206491 14120185 ~ 14122057 (+) False smim22
XM_043233930.1 mRNA upstream 11034 13888940 ~ 13902589 (+) True crlf3
XM_043235797.1 mRNA upstream 105441 13796853 ~ 13808182 (+) True traf7
XM_043235798.1 mRNA upstream 105441 13796853 ~ 13808182 (+) False traf7
XM_043233953.1 mRNA upstream 143678 13767191 ~ 13769945 (+) True rpusd1
XM_043233954.1 mRNA upstream 143678 13767191 ~ 13769945 (+) False rpusd1
XM_043235136.1 mRNA downstream 68560 13982254 ~ 13986772 (+) True scpep1
XM_043228898.1 mRNA downstream 82267 13995961 ~ 14002378 (+) False slc16a3a
XM_043228897.1 mRNA downstream 83192 13996886 ~ 14002378 (+) True slc16a3a
XM_043235003.1 mRNA downstream 115811 14029505 ~ 14036025 (+) False dus1l
XM_043235002.1 mRNA downstream 115851 14029545 ~ 14036025 (+) True dus1l
TU29613 other upstream 211270 13698574 ~ 13702353 (+) False rbbp6
TU29192 other upstream 925710 12835381 ~ 12987913 (+) True LOC122332158
unassigned_transcript_277 other upstream 1025562 12887157 ~ 12888061 (+) False LOC122332158
XR_006250478.1 other upstream 1384820 12519837 ~ 12528803 (+) False gtpbp1
TU28786 other upstream 1399902 12511926 ~ 12513721 (+) False G19326
TU29734 other downstream 135796 14049490 ~ 14053032 (+) True G19973
TU29797 other downstream 204773 14118467 ~ 14119570 (+) True G20015
XR_006248644.1 other downstream 341796 14255490 ~ 14267791 (+) False abcc1
TU29992 other downstream 621485 14535179 ~ 14615408 (+) True G20148
TU30017 other downstream 705300 14618994 ~ 14622858 (+) True G20167