RNA id: unassigned_transcript_291


Basic Information

Item Value
RNA id unassigned_transcript_291
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnac-gca_3
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20314260 ~ 20314331 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gggggtatagctcagtggtagagcatttgactgcagatcaagaggtccccggttcaaatccgggtgccccct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32185 lncRNA upstream 116 20230015 ~ 20314144 (+) False G21655
TU32184 lncRNA upstream 116 20313295 ~ 20314144 (+) True G21655
XR_006250526.1 lncRNA upstream 128734 20173694 ~ 20185526 (+) True LOC122342124
TU32179 lncRNA upstream 141258 20168636 ~ 20173002 (+) True G21652
XR_006250469.1 lncRNA upstream 153049 20160436 ~ 20161211 (+) True LOC122341550
TU32192 lncRNA downstream 25560 20339891 ~ 20345356 (+) True G21660
TU32193 lncRNA downstream 26741 20341072 ~ 20342296 (+) True G21661
TU32202 lncRNA downstream 79230 20393561 ~ 20393901 (+) True G21669
TU32204 lncRNA downstream 93461 20407792 ~ 20408327 (+) True G21671
TU32232 lncRNA downstream 166000 20480331 ~ 20518038 (+) True G21687
XM_043235103.1 mRNA upstream 4800 20296472 ~ 20309460 (+) True lasp1
XM_043235940.1 mRNA upstream 23783 20287163 ~ 20290477 (+) True arl5c
XM_043235196.1 mRNA upstream 29360 20254824 ~ 20284900 (+) True cacnb1
XM_043235198.1 mRNA upstream 29360 20254825 ~ 20284900 (+) False cacnb1
XM_043235199.1 mRNA upstream 29360 20254825 ~ 20284900 (+) False cacnb1
XM_043235443.1 mRNA downstream 1987 20316318 ~ 20320290 (+) True atp6v0ca
XM_043235622.1 mRNA downstream 7614 20321945 ~ 20327552 (+) True spsb3a
XM_043225682.1 mRNA downstream 13825 20328156 ~ 20331230 (+) True mrps34
XM_043229013.1 mRNA downstream 17003 20331334 ~ 20334050 (+) False nme3
XM_043229006.1 mRNA downstream 17612 20331943 ~ 20334050 (+) True nme3
TU32181 other upstream 126177 20187528 ~ 20188083 (+) False eftud2
TU32173 other upstream 127062 20185567 ~ 20187198 (+) False eftud2
TU32169 other upstream 206424 20106846 ~ 20107836 (+) False LOC122341546
TU32077 other upstream 246259 20064490 ~ 20068001 (+) False LOC122341338
TU32078 other upstream 246259 20066130 ~ 20068001 (+) False LOC122341338
TU32806 other downstream 981371 21295702 ~ 21414286 (+) True G22087
XR_006248723.1 other downstream 1323412 21637743 ~ 21734127 (+) False crhr1
TU33098 other downstream 1660921 21975252 ~ 21976665 (+) True G22301
XR_006248300.1 other downstream 1662178 21976509 ~ 22025911 (+) False wnk4b
TU33161 other downstream 2214658 22528989 ~ 22530060 (+) True G22344