RNA id: TCONS_00010005


Basic Information

Item Value
RNA id TCONS_00010005
length 127
RNA type rRNA
GC content 0.43
exon number 1
gene id XLOC_005184
representative True

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 9117052 ~ 9117178 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ttcaattctaaaacgccgttttaaaactaaaacgcactagtgtaaacggggcctaaagctaagcagggctgagcctgttcagtacctggatgggagaccacatgggaaaactagatttctgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120256

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00010000 lncRNA downstream 29486 8996035 ~ 9087566 (-) False XLOC_005182
TCONS_00010003 lncRNA downstream 32484 9063675 ~ 9084568 (-) True XLOC_005182
TCONS_00009995 lncRNA downstream 521688 8590929 ~ 8595364 (-) True XLOC_005179
TCONS_00011100 lncRNA downstream 542027 8573933 ~ 8575025 (-) True XLOC_005178
TCONS_00011099 lncRNA downstream 636344 8477459 ~ 8480708 (-) True XLOC_005175
TCONS_00011101 lncRNA upstream 110208 9227386 ~ 9228629 (-) False XLOC_005185
TCONS_00011102 lncRNA upstream 110208 9227386 ~ 9237794 (-) True XLOC_005185
TCONS_00010026 lncRNA upstream 943458 10060636 ~ 10063668 (-) True XLOC_005199
TCONS_00011103 lncRNA upstream 1007482 10124660 ~ 10129902 (-) True XLOC_005200
TCONS_00010030 lncRNA upstream 1098152 10215330 ~ 10220119 (-) True XLOC_005201
TCONS_00010001 mRNA downstream 29486 9049339 ~ 9087566 (-) False XLOC_005182
TCONS_00009999 mRNA downstream 32412 8968275 ~ 9084640 (-) False XLOC_005182
TCONS_00009997 mRNA downstream 158699 8954761 ~ 8958353 (-) False XLOC_005181
TCONS_00009998 mRNA downstream 159041 8956399 ~ 8958011 (-) True XLOC_005181
TCONS_00009993 mRNA downstream 299053 8581875 ~ 8817999 (-) False XLOC_005179
TCONS_00010006 mRNA upstream 3588 9120766 ~ 9123352 (-) True XLOC_005183
TCONS_00010007 mRNA upstream 140279 9257457 ~ 9294819 (-) True XLOC_005186
TCONS_00010010 mRNA upstream 243143 9360321 ~ 9438227 (-) True XLOC_005188
TCONS_00010011 mRNA upstream 332487 9449665 ~ 9468618 (-) False XLOC_005189
TCONS_00010012 mRNA upstream 332489 9449667 ~ 9468618 (-) True XLOC_005189
TCONS_00010002 other downstream 65874 9049532 ~ 9051178 (-) False XLOC_005182
TCONS_00009996 other downstream 256745 8860193 ~ 8860307 (-) True XLOC_005180
TCONS_00009989 other downstream 673031 8443904 ~ 8444021 (-) True XLOC_005174
TCONS_00009977 other downstream 1613954 7502962 ~ 7503098 (-) True XLOC_005164
TCONS_00009972 other downstream 1881949 7223789 ~ 7235103 (-) True XLOC_005159
TCONS_00010008 other upstream 228186 9345364 ~ 9345485 (-) True XLOC_005187
TCONS_00010009 other upstream 243138 9360316 ~ 9363873 (-) False XLOC_005188
TCONS_00010015 other upstream 393402 9510580 ~ 9516981 (-) False XLOC_005191
TCONS_00010016 other upstream 393693 9510871 ~ 9516953 (-) True XLOC_005191
TCONS_00010021 other upstream 531050 9648228 ~ 9648345 (-) True XLOC_005195