RNA id: TU255975


Basic Information

Item Value
RNA id TU255975
length 1765
RNA type TUCP
GC content 0.48
exon number 8
gene id G172737
representative True

Chromosome Information

Item Value
chromosome id NW_025047686.1
NCBI id JAEQBD010000031.1
chromosome length 1000000
location 465438 ~ 482032 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aaataaaaatgcatagtttacacatatgtgcatatacatatttagtgtatgcaataaatattatttgataaaatagaagacatgtttatgttttatggggtatttttatttaaatacaacttGATTGATTCACTTTTTACAACCAAGACTGAAATTAGGTGAAGCCTCGACGACAGGCGCTCACTCCTGCGCCGGGAATCTGATCCCAAGATGTTACCAACTGAACAGAAAAGTGGAAAAAAGTGATGGCAAAGTGACatggaaaataaagaagaagggaaaaaaaaggaaatcaagaCAGATGCAAAGGCGAGACTGTCTTTTTGAGCAGCAGTTTCCTCTGCATTGATGTCAGATTGCACGAtggactgtaaaaaaaaaaaaagacaagacgaggaaaaaaaaaaggaagggcTCCCGCTTTACTTCTGGGCAGGGATCATGCTGTCAATGGACTCGCCCTTCTCCAGCTTCTTCTCCATCTCAACCATCAGCTTGACGCCATCAACCACACACTGTACTTGCTCAACCTCTGAAGAGCCAATACGATCAGCGTTGGAAATGTCAAACACTCCACCGACGGCAGGCGCAGTCTGGTCAGGATCTCCTCAAACTTGGCATGTGTGCTCAGCTTGGGCAGCTTGACGTGGACACCACCACGCAGGCCTGTGCCCAGGTTGGAGGGGCAGGTCAGGACGAAGCCAAGATGCTCGTTCCACATGTAGTCATGGTTGTGCTTCTTGAAAATATCCTCAATCTGTTGAACCAACGCAGAAGCGTTTGAACACTTCCTTCATGTTGCCACCCTTCTGCATGGAAATGACACGCAGGTGATCCTCCTCATTCACCCAGACCAGGAAGGTCTTGTTCTCATTGTGCCATGCCTCTGGCATCGGGCCAGTCGCGGGCCATACCAGCAGCCAGCAGCAGGGGGGAGACGGGTTTGTCAAAGAGGAAGTGGTCAGCGATCAGCTGCTCCTGCTCAGCATCAGTCATGGATTTCAGGGGGTAGTATTTGCCCTTGAATTCTCCATCCAAGCTGTTCAGAGCTCAACAGACAGCTTCTCCACAGCTCTGCGCTCTCCACGGCTGTTGTGGGGGGGCAGGGCGTATCCCCTAATGCTGCGGCCGGTACGCACACGGCTACTGAGAACATAGTTGGGGTCCAGGTCATCTCCaccttCAGGTTCTCGAAGTTGAGGTCGGTCTTGTGCTTGTCTGTTGCCTTGTATCCACCATGACGGTCGGAAATGACAGGGTCAAAGAGATCCTTAAACACTTCATAGGACTCCTCATCACCAGCAACACAGCCGACAGTCATGATGAAGGGTCACCTGGGTTGTCAACACCAGTCTGGATGGCATCATCCAGGGTGAATCCAGTGGGGGTCTGCTTGTCCCTAAGCTTGGCATACATTTCCTTAGTCAGCACCTTGGCCATGTGGTTGTTGTGCTTGGTAAGGTCTGGATACTCATCTTCAACTTTGAAGTTCAGCTTGAAGTTGTTGTGGGTGTTTCCGAAAGGCATGGTTGCGTTTCTAACACTAAAGATTGGACAAGTGGAAAAGACTGCACACAAGACAATAAAAGTGGTAACAGTCCTTGGGATCAGATCCTGTTCACCAAAGCCGAAATAGGGGTCACCCAAGCAAGAAGAGTCTGATTTGGGTTTATATACCTCCAACCCCTGCAGCCATTGGCTAGCCCATTTTAGAGCTCActgaattctgattggctggcccCGGTATCTTATGCCCTGTTTAGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256031 lncRNA upstream 12138 441054 ~ 453300 (+) True G172777
TU256008 lncRNA upstream 113900 293647 ~ 351538 (+) True G172755
TU255962 lncRNA upstream 406000 59199 ~ 59438 (+) True G172733
TU255950 lncRNA upstream 430107 34860 ~ 35331 (+) True G172723
TU256068 lncRNA downstream 43074 512574 ~ 513327 (+) True G172804
TU256041 lncRNA downstream 84264 553764 ~ 554790 (+) False G172784
TU256044 lncRNA downstream 84264 553764 ~ 687206 (+) True G172784
TU256063 lncRNA downstream 199863 669363 ~ 672910 (+) True G172800
TU256042 lncRNA downstream 214215 683715 ~ 687206 (+) False G172784
XM_043229483.1 mRNA upstream 375 433795 ~ 465063 (+) True LOC122332182
XM_043229517.1 mRNA upstream 9308 446410 ~ 456130 (+) True LOC122332221
XM_043229516.1 mRNA upstream 9308 448505 ~ 456130 (+) False LOC122332221
XM_043229514.1 mRNA upstream 20986 441763 ~ 444452 (+) True LOC122332218
XM_043229509.1 mRNA upstream 175207 284894 ~ 290231 (+) False LOC122332211
XM_043229466.1 mRNA downstream 6921 476421 ~ 478867 (+) True LOC122332165
XM_043229494.1 mRNA downstream 77654 547154 ~ 548637 (+) True LOC122332199
XM_043229495.1 mRNA downstream 96959 566459 ~ 574866 (+) True LOC122332204
XM_043229484.1 mRNA downstream 188617 658117 ~ 667257 (+) True LOC122332186
XM_043229473.1 mRNA downstream 221115 690615 ~ 698060 (+) True LOC122332170
TU256032 other upstream 9358 446541 ~ 456080 (+) True G172778
TU256247 other downstream 336057 805557 ~ 811855 (+) False LOC122332175

Expression Profile