RNA id: XM_043229488.1


Basic Information

Item Value
RNA id XM_043229488.1
length 3618
RNA type mRNA
GC content 0.42
exon number 14
gene id exoc3l4
representative True

Chromosome Information

Item Value
chromosome id NW_025047686.1
NCBI id JAEQBD010000031.1
chromosome length 1000000
location 13104 ~ 25129 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCACATTGTATTTACGGGAATCTGAAAGAGAAGTGTAATCGTTTTTCAGAAACGCTGCCTCTTACAAGTACGCGTCAGTACGCGGAGAGTTTCTGAAGCTAGTTCCTGTAGCAAAGCAGCCCGGCGCACCTTTACCTTTGACGTTTCAAGGTGAACGCCAGCTGCGAGGAGCGGGGTTTTTCGGAGCTCGGTATTTCCTGCAATTGATCGGTTTGTTCCCGCGGTTGAACCTGTCGGTGCAGCGCGATTGCCAGCATTTTGTTTTGCGATAAGTTTCATGGGAAGGATAATTGCCAGCGGCTTCGACGAAGAGCTCGGATCTCAGCCTTGAACTAACCGATACATGGTCAAATGGCAGAAACTACAAAAGAAGAAGTAGATGGCGGAAATAAGGTTAATGACCCACCAGAATGGGATGAGGATACGACCAAGGGCTTGAAAAATGGTGGAGAACAGATGGAAAGTCTGGTCAAAGAGAAGAGTCTTGGAGTCTTGAAGACATTCAGGAGGAGTTTGAAAGGGTTCAGCCCTAAGACACAGAAAGACAAAAGGTCAGAGAACACAGATGACCAAAGCTCAAATTCTCCATTACGTCCACCACACTCTCCAAGTTTGAGCAGAGAATCTCCTTCACAATCTTCATTCCAGGCTCCAAAGACTGAAAAATCTTCTCTTACAAGAACTATGTCAGATTCTGCAGTTGAAATAACAGGTTCACTGGCAAGGAGAGGTGCATCGATCAGACAGAGCTTGGGTCTGGGtactaaaaaatacaaacaggaaCCACTTGAACCTGTCACAGAGGCCATGACTTTACCTGAAGAGCAAACCGAGGTCGTAGACAGAGTGCTGGAGCTCAGAGACACATATACTCTGCCAGAGATACCTCATATGCCTTTGTCAGTGATGGAGATTAACAGACTAATAGAGAAAGAACATTTAGAAGAGGCCTACGTGAATCTGTTGTCACTACGCCTGGAATTTCAGCGGGAGCGTCAAGCTCTGGAGCAAGAAGACTATCCCATTGAAGTAGTCAATAAAGAGAAAGACCTCGGCCTGCTCTGTGGCACACTAAAGAACAAAATGTCTGCAATTGTTCACAACTCCAGCGCTCTTCCCTTACACAACAAAGAGCTTCTGGTGTATGTGTCATACATTATCCTGGAGGAAGAGAAGAGACAGGGGGAGCCAGGAGcgatggagggatggagggaagCGTGGAAAGAGGCCGTACTGAACGGGGTTCGAGATACACTGAAGAATGTTCCTCTGGACAGCCGCGAGCAGAACGCTTCTTGGCTGGCAGTACATCTGGGGCTTCTGGGTAAAGCTGTGGTGGAGGATTTGGAGAGAGTGAAGACTGAGCTTCTGAGCTCGTATCCAGCAGACTTCAATGTGCTTGAAACCTATGTGTCCTGCCACCATGAGGCTGTAGGGGAGCATCTAAAGAGACTTCTGCTAAACGTGACCGAGCTGAAGGATTACTACGCTCTTCTGGATTTTATTATTCATCGCTACCCCAGTGAGAAGATAATGGGAAGCAGCTCTCTGCAGCCTGAATTGAAGGAGGATCAGAGAGCACTGCCATTGAACAAAGATTTCCTTAATCAGATAAAAGACAAATACTGTGCTCGCTTACAGGCTGACATGAAAACATCACTGAACAGAATTATTGACTTGGAGAAAGAAGAAATGTGGAATGAAAAAAGAACACCAGAGATTGATGAGGGAATCTACAGCTCACACATTGACATGGACATCTGGACGAACATTAAAGGGCATGTACAAGGATCCAGAAGAATCGATGTGAACCTTGAGCAGAAGGTTGTGCGTTCATGTTTAGAGGAACTGAAGAACTTTCCAAAACGGTTTGAGTCAGCGTTTGTCGAGTGGAGCAGTCCTCTCTCTAACTCCTTTCTCTGGGCCGAGTATTATATCAGCTACATCAACAGCTTCAGTGCCCTGAAaGAGCACATGGAGAGCTATAAAGACACCTGTCCGATCCAGCTGGAGCTGGTTCAAAAAGAAATAGACAGACTGACGAGCAGTTTGAGTCGAGCTGTGATGGAGAACTTCAAAACAGATGTCAAGCCCTTCCTCAGGAGACAAATGACAGGGAAATGGTTTTCATTCGATGAAGACTTTTTACAGCTGATTCGCAGAACTAAGATCCTTTCTGAACAAATCAAGTGTATGATCCCAAAACATAAACAGGCTTTTGTGAATGAAGTTCACTTTTTTGTTGTGAAAGAATATGTATCTCAGCTGATGAAAAATAACTACTTGTGCAAAAACAGGAAGAATGAGACAGCTGCTACTAAGATCAAAAATCAGTGGGAGGAGCTGAAGGAGATCTTCCGAGATATGaactCCACCTTAGGCTGGCTCCATCCAGTCGGGAACCAGCTGAGCGATATCATTGGGTGCAAAAAAAGTGATGTAAAAAATAACCTAAAGCCATTAGTTGATAACTATCCAGATATCAGgaaGGCTCATCTCTCAGCTGTGCTGTACTTCCGAGGAATTATAAGAGGCAGGGAAAAGCATATTATACTACAGCGGCTGGTAGagctgaaacagaaaacagggAGCGCAGGGAATAGAGAGCAGGCTCTCTTTAGTGAGATTCAAGCAGCAGTTAACACAGACTGCCTGGCTGGTACACCCTTTTCCTGTATGTCCTTCATCGGCCCGGAGAGATAATGCACTTCGTTGAACTGTTTGAAAGTGACCGTATGTCTAATACACAGTACAAGCAGAtaaggaatgttttttttacttttaaaacattggTGTCTGTCTGACGAAAAAGATCAGGTAAAGAGGAGGCTACAGTGTTTTTAGTGTGCTGTGAACATAATTATGCCATTGAGTAATGATGAAGTACCACTAGACCTTAAAATGTGAAATCTTAGTCATTCAATGTAAAATTGTCTTCATTCAGAAATTGCTAATTTATCCTGCTGATTGTAACTTTCAAAACATCTTCTCTATTCCACCAGACGTCTCTACAAACAGCAAACAGCAGTGCactttgcaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacatgcattattattctaaattactgatcagtttaatatttttcctaaaCATTACTCAAACGTGAAGTGTTTTAAGAATTATTTGAAAACGTTAATttggttttaaattaattttctggATTTCAAAACGTACTGTTTTTGGCCCTCTGCCGGTTGAAGCGTAAAACTGCACGCTGCTTGCGGAAGAACATTGTTATTGTAGTTAGTTGTGCTTCAGCGCGGATGAATCTGAATCCGTGCTTACAGATAATCACTTTATCAGTGGACcgtcacaaaataaataaatacatctcaAAGAAATATCGGTGCCTGAAAAATACATCTAGAGCAGGAAAGCAgcttatatacttttaaaagaacttttaaaaagcaatgcTGACATTATTGCTATTCATATCAGGTGAGGTAAAATGGTAAACATGGCTAGTAGgctatttatatgcaaatagaCAAATGAAGTTTATCTGGTTTAACTAGCCATTGTgactaataaaattattttgtaaaccgG

Function

GO:

id name namespace
GO:0006887 exocytosis biological_process
GO:0000145 exocyst cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU255950 lncRNA downstream 9731 34860 ~ 35331 (+) True G172723
TU255962 lncRNA downstream 34070 59199 ~ 59438 (+) True G172733
TU256008 lncRNA downstream 268518 293647 ~ 351538 (+) True G172755
TU256031 lncRNA downstream 415925 441054 ~ 453300 (+) True G172777
TU256068 lncRNA downstream 487445 512574 ~ 513327 (+) True G172804
XM_043229497.1 mRNA downstream 18706 43835 ~ 48327 (+) True tnfaip2b
XM_043229492.1 mRNA downstream 55796 80925 ~ 87227 (+) True LOC122332195
XM_043229493.1 mRNA downstream 56331 81460 ~ 87227 (+) False LOC122332195
XM_043229507.1 mRNA downstream 63585 88714 ~ 114288 (+) True mark3a
XM_043229501.1 mRNA downstream 63587 88716 ~ 114288 (+) False mark3a
TU256032 other downstream 421412 446541 ~ 456080 (+) True G172778
TU255966 other downstream 440309 465438 ~ 482032 (+) False G172737
TU255972 other downstream 440309 465438 ~ 469500 (+) False G172737
TU255975 other downstream 440309 465438 ~ 469500 (+) True G172737
TU256247 other downstream 780428 805557 ~ 811855 (+) False LOC122332175

Expression Profile