RNA id: TU260156


Basic Information

Item Value
RNA id TU260156
length 761
lncRNA type inter_gene
GC content 0.39
exon number 4
gene id LOC122332683
representative False

Chromosome Information

Item Value
chromosome id NW_025047819.1
NCBI id JAEQBD010000164.1
chromosome length 87742
location 22934 ~ 32697 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGTACCTCGTGAACCCAGGGAGCCAAGACGAGTTCATGGAGAAGTTCCTCGACGGGACAATCATGTTCGGCTCCTGGTTTGATCATGTGAAGAGCTGGATTAATGCTGAAGAAAAGGAGTCCATACTGTACGTTTTCTACGAGGAGATGATCGCCGACCTGAAAGGCTCCGTGGAGAAAATCGCCAAGATTTCTCGGTAAACCTCTGAGTCGGACGTGTGGAGAAGATCGCCGAGCACTGCGTCTTCAAgaacatgaaacaaaacaaaatgtccaACTTTTCTCTGGTTCCGGAGCAATACATGGACCAGAAAAAATCGGAGTTCCTGAGGAAAGGAATCGCCGGGGACTGGAAGAATCTGTTCACCCAGGCCCAAGAGCAGCGATTTAATGCCGTGTACGAAGACAAGATGAAAGATGTGACATTCAAGTTTATGTGGGactgaaaaaataatcatactcgcttttaataagcattttatattcatttttaaccttttgttgcatgcttttttaattgtaagTATCAAATGCGCAGTTTATACACTGTTGATAATTTGCTCTACGAAAGTAATTATTACTAGCTACTAATTATGTCTAACAGTAGCTAATTACTCTCTTTAGGTATTGCATAATTACATTCTACACACTGTGGCATATATATGAAACctcttttcatttgttaaaatcatataaaatgacattattgaaaatgtattactattgaactgactaaaatattaaaaaacacagattttacaA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248512.1 lncRNA downstream 175 32872 ~ 33671 (+) True LOC122332681
TU260159 lncRNA downstream 221 32918 ~ 33669 (+) False LOC122332681
TU260163 lncRNA downstream 2483 35180 ~ 36863 (+) True LOC122332686
XR_006248513.1 lncRNA downstream 3314 36011 ~ 36891 (+) False LOC122332686
XM_043230061.1 mRNA upstream 5179 22934 ~ 25907 (+) False LOC122332683
XM_043230062.1 mRNA downstream 4492 37189 ~ 38235 (+) True LOC122332684
XM_043230063.1 mRNA downstream 9176 41873 ~ 45411 (+) True LOC122332685
TU260154 other upstream 242 26440 ~ 30844 (+) True G175398
TU260160 other downstream 5515 38212 ~ 45278 (+) False G175402
TU260161 other downstream 6402 39099 ~ 45278 (+) True G175402
TU260162 other downstream 9118 41815 ~ 45278 (+) False G175402

Expression Profile