RNA id: TU260159


Basic Information

Item Value
RNA id TU260159
length 476
lncRNA type inter_gene
GC content 0.42
exon number 3
gene id LOC122332681
representative False

Chromosome Information

Item Value
chromosome id NW_025047819.1
NCBI id JAEQBD010000164.1
chromosome length 87742
location 32872 ~ 33671 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTATTTACGCGTTTGGCGTTCAAGGagctaaaatatattacaacagAACTTACTTATAGCAACCActattttgtgttattaaatattgtatatataatataaaacggACGCGATGTTTCTTAAGGTACctatttaaacagcaaaaaatctAGTTTCCCCTCTTGACAGATATATAAAAGCcacaattcaatttaaaatatcgCTTTACATTGTGTCACGAAGCCCTGCACTGATTCAGGTCACCTGGAGTCGTTTGAAGAAGTGGCTGCGAATGTATAGCTGGAGAACATCTCGTTTTAAATGAGAAGACAAAGGTTGGAAGGTGATGGCGAATAAACAGGGAACGGACAGCGGCCCTCAGAGACATCAGGGGCCCCCGGTAAGGTCAGGGGCCCCGGATGAAGCGCTATCTTCAACATCCGGAACAGACCGAAGCCTCTCGCTGTAAACATTGAAGGAGGAGGTCGTCGACTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU260156 lncRNA upstream 221 31086 ~ 32697 (+) False LOC122332683
TU260163 lncRNA downstream 1511 35180 ~ 36863 (+) True LOC122332686
XR_006248513.1 lncRNA downstream 2342 36011 ~ 36891 (+) False LOC122332686
XM_043230061.1 mRNA upstream 7011 22934 ~ 25907 (+) False LOC122332683
XM_043230062.1 mRNA downstream 3520 37189 ~ 38235 (+) True LOC122332684
XM_043230063.1 mRNA downstream 8204 41873 ~ 45411 (+) True LOC122332685
TU260155 other upstream 221 24486 ~ 32697 (+) True LOC122332683
TU260160 other downstream 4543 38212 ~ 45278 (+) False G175402
TU260161 other downstream 5430 39099 ~ 45278 (+) True G175402
TU260162 other downstream 8146 41815 ~ 45278 (+) False G175402

Expression Profile