RNA id: TU260163


Basic Information

Item Value
RNA id TU260163
length 705
lncRNA type inter_gene
GC content 0.42
exon number 4
gene id LOC122332686
representative True

Chromosome Information

Item Value
chromosome id NW_025047819.1
NCBI id JAEQBD010000164.1
chromosome length 87742
location 35180 ~ 36891 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGAGAGACTAGTATAAAACAGCACACAATAAATTAGTCATTCAGTTTGGACAGGCATTCAATGAGTGCGTACACAGGATGCAAATATGGATGACGCAATTCGTAAGAAAgtgatcaaaataataaaaaagcatccACATGGGATTGCTTTTAATGAATTAGCAAGAGGAGGTCTTTGCTCAGAAACATAAACAGGCCCTTTTGCCGGCTGAACTGGGCTTCCCTTCAGTGGAAGCCTTTGTGGACTCTCTTGGCGGGGATCTGTTGGTGGAAGATGGTGTAATCTTTCACAAAACCAACATAGTTCTTTCAGATGAAGACTTTCAAAAGACGTGCAGAAATGTTGTGGATTTGGTAAAAAGCCACCAGGAAGGCATTCCTCTTTCAAAACTAGCAGCATTTATAAAAGTGAATATGGGAGGCCTCTGATAAAGAAAGAACTTGGCATCTCATCGATAGCAGATTTCGTTGACTCTCTGAACCCAGAGCTATATGTAATAAATGGCCAAATTTTCTACAGGATTGCCAAGGCTAAAGCTTCAAGCCATACAGCACCACCCGTGCATGTTAATGGGGTTTTTAAAGAAGTTGTGGAGCTGGTTAAGAACCATCCCACAGGCATTCCTCTTAGGAAGTTGTCCATGTTTTACAGTCAAGAGTATCGGCGTAACCTCACCGTGTCAGAGTTTGGTTTCAGAACAATCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248512.1 lncRNA upstream 1509 32872 ~ 33671 (+) True LOC122332681
TU260159 lncRNA upstream 1511 32918 ~ 33669 (+) False LOC122332681
TU260156 lncRNA upstream 2483 31086 ~ 32697 (+) False LOC122332683
XM_043230061.1 mRNA upstream 9273 22934 ~ 25907 (+) False LOC122332683
XM_043230062.1 mRNA downstream 326 37189 ~ 38235 (+) True LOC122332684
XM_043230063.1 mRNA downstream 5010 41873 ~ 45411 (+) True LOC122332685
TU260155 other upstream 2483 24486 ~ 32697 (+) True LOC122332683
TU260160 other downstream 1349 38212 ~ 45278 (+) False G175402
TU260161 other downstream 2236 39099 ~ 45278 (+) True G175402
TU260162 other downstream 4952 41815 ~ 45278 (+) False G175402

Expression Profile