RNA id: XM_043230062.1


Basic Information

Item Value
RNA id XM_043230062.1
length 762
RNA type mRNA
GC content 0.47
exon number 4
gene id LOC122332684
representative True

Chromosome Information

Item Value
chromosome id NW_025047819.1
NCBI id JAEQBD010000164.1
chromosome length 87742
location 37189 ~ 38235 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGTCACTTTATGACAACCATACAGCTAAACAGCCTACTTCCTCTTGTCTTGTTGGAAATAATAAGCGAGCAGGAGCAAAAAAGATTATCGAGGAAGTAAAGAAGGTTCAGCCCGTGCGTGTTGTGGTAAATGAACAAGTGGGTCGGTCCAAGGCAGGATCTCCTTTTAGCCGGTTTCCAAATTTAACCGTCTCACCCACAGCAATCCCTTGTAATCTGTCCACAAGTGACTTCCCAGTTCTTGGTACTACGGTGTCCAGAACTGAGGAGAAGAAAGCTGAAGGAGGAAAGGGGCCTGTCTTCAATGAATCCTACTACAGCCAAGTGAGAGAGGTCCATGGTGCTAACATGAGAGCAGCAGAAGCCTTGCTGGAAGATGAAGACAATTTTGGGAGACGGAGAAAGACCATGAGCTCAAAGGATGTGAACTGTTTGGTAGAGGATGTCATGAGAGCCCTTGCAGGCGAAGGAGAGCATGTCACCCTCGACAGGGTGATCAGCAGAGTTTGTTCACTTCTGCAAGTGTCCAGCTTGAAAGATATGAATATCGACACTCGTCGGCATCTGCCTGCAGTGCAGGAACTTCAGCGCACCATCAAGGAGATCAATATGTATATCGAGTCAGTGGAAGTGGTTTCCTCTATATGCACGCTTTACGAATTGGGACAGGCTTTGGCCAACCTGAAGAACAAGAAGCGCTTTGAAGAACTCCATCTGGGCCCTCTCTGCAAGATCCTCTTATTCacagaatgttcaaaatag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248513.1 lncRNA upstream 298 36011 ~ 36891 (+) False LOC122332686
TU260163 lncRNA upstream 326 35180 ~ 36863 (+) True LOC122332686
XR_006248512.1 lncRNA upstream 3518 32872 ~ 33671 (+) True LOC122332681
TU260159 lncRNA upstream 3520 32918 ~ 33669 (+) False LOC122332681
TU260156 lncRNA upstream 4492 31086 ~ 32697 (+) False LOC122332683
XM_043230061.1 mRNA upstream 11282 22934 ~ 25907 (+) False LOC122332683
XM_043230063.1 mRNA downstream 3638 41873 ~ 45411 (+) True LOC122332685
TU260155 other upstream 4492 24486 ~ 32697 (+) True LOC122332683
TU260161 other downstream 864 39099 ~ 45278 (+) True G175402
TU260162 other downstream 3580 41815 ~ 45278 (+) False G175402