Fish Transcriptome and Expression Database

RNA id: TU261988

Basic Information

Item	Value
RNA id	TU261988
length	1231
lncRNA type	inter_gene
GC content	0.46
exon number	2
gene id	G176652
representative	True

Chromosome Information

Item	Value
chromosome id	NW_025047825.1
NCBI id	JAEQBD010000170.1
chromosome length	69096
location	56362 ~ 58548 (+)
genome version	ASM1883169v1_2021_tiger_barb_Genome
species	tiger barb (Puntius tetrazona)

Sequence

ATTTCTGCTAAAAGGACTGCCCATTCCTCTTGGCCAATGCAGTTTATTCTAAAGTAAAGCGAATATCGCAATGATAATATTCTGCAGCGCAAAGATTAACACACAATCGATCAGCAAACTGTTTTATTGCATGCAAATTACAAAACACATTGTTTGAATACTACTCAAATTTCCTTTCCATAAAGTGCCTTGAAAATACAGCCCCTTTATGTTTAATGCACATGCACGATTGTATTATTACACAATTCATCAAAACCAAAGGTTGCAAAGATTGCAACGGCGAActcattcaaaaatataatcaCTCGCTCAATCCCTGAAGCGACATCCCAAAGGCTTTTTCGACCCCTCCGACCGACCGATGCAATCAGTTCCCAAAAgttaaaatctaatttgcatTGAATATACTGTCAGAAAAtacatccatttatttattccgCCTTCATTATAAAAGCGATGTTCAGTATACTATGCACTACATTATGCATGAATTTGTACCTGCTTCAAGCTGTTATTCTAAAGAGTCATCAACAGCATAAAGTACATAGTTAAAAGTGCAAATGCATAAACTGCCATCCTTTCAAAATACGTCAGCGATGGACAATAAAACGAAAGCTGTGCAACTGTGCTTGTTTCTCTAGTGAGCACTCCCTCGCTCACTAGGGGTCAGTGTAGTGTGCTAGCAGGGACTTCCACTGCTCTTGTCCGTACGCGAGGAAGCGGGCTGCGCAGCGGAGGTCCTCCAGGTCTATGTTGGCGAGGAAGCATCTCTGGAGTTCGGCTTCCACGGAGCTCCCGCCGGACCCTCGGCCCTTCAGCAGCACCACAGCTGACTGACACAGCAGCCAGTCCGACAGCTCGTCCATTCTGGTCCGATCCAAGCTGGACAACGCTCGCCTGCCCCACAGGCTCATGTGAAGCATGTTAGCAGCCACACGTGCACTGGGCACCTTGCGAGTGTTTCTGCGCAGCAGTAGCTTCACTACTAGCTGTACATCCTCAGGTACAGcagcaggaagaggaggaagctGTTGTTCCTGATAACTGCGACTCTCCAGTCCCTCTGAGCTGTAGAAGGGGTTCGGCTGACCGAAGAGCTCATAGGCCATGGCACCTACAGCCCAGGCGTCTGCTTTACTGTAATCTATCATCACCCCAGGTCCTGGAACTGCTGTGGCCACCTAGAAGACAAAGGAatcataattacattacatttgataCATAAAAATCG

Function

GO: NA

KEGG: NA

JBrowse2

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
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Neighbor

RNA id	RNA type	direction	distance	location	representative	gene id
TU261989	lncRNA	upstream	4881	50531 ~ 51481 (+)	True	G176653
TU261990	lncRNA	upstream	5245	50377 ~ 51117 (+)	False	G176653
XM_043230372.1	mRNA	upstream	6199	43703 ~ 50163 (+)	True	LOC122332905
XM_043230373.1	mRNA	upstream	6199	43703 ~ 50163 (+)	False	LOC122332905
XM_043230375.1	mRNA	upstream	16136	35761 ~ 40226 (+)	True	LOC122332907
XM_043230374.1	mRNA	upstream	20623	33397 ~ 35739 (+)	True	LOC122332906
XM_043230371.1	mRNA	upstream	23499	30868 ~ 32863 (+)	True	LOC122332904

gene	XLOC_000007 f7
RNA	TCONS_00000019
bioproject	PRJEB12982

ornamental fish

Basic

Function

Jbrowse2

Neighbor

Expression

RNA id: TU261988

Basic Information

Chromosome Information

Sequence

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

Expression Profile

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