RNA id: XM_043230372.1


Basic Information

Item Value
RNA id XM_043230372.1
length 3109
RNA type mRNA
GC content 0.45
exon number 15
gene id LOC122332905
representative True

Chromosome Information

Item Value
chromosome id NW_025047825.1
NCBI id JAEQBD010000170.1
chromosome length 69096
location 43703 ~ 50163 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gagagagagagagagagagagagagagagagagagagagagagagagagagagaatgtttaTGTCGCTGTGAATCTCTGCTAATATTAATGCGCATGTCTCATGGTTTATGAACGCGTCActcagatggatggatgaacttCTGTCACCATTAGCAGCGTCTTCGGGCAGAAGAACACATGGTCATGATGAGGATGGTGGTGCTATCACTCTCTGTAATGATGGTCTATGTGCTCCTGATGGATGCTACGGTGGAAAGCGCTGCAGAATTTGATCCATATAAAGTTCTTGGAGTCACCAGAAGCGCAAGCCAAGCAGAAATCAAGAAAGTGTACAAACGCCTGGCCAAGGAATGGCAtcctgataaaaacaaaaatcctgaAGCAGAAGACATGTTCATCAAGATTACAAAGTCATATGAGATCTTAACAAACGAGGAGAAGAGAGCCAGCTACGATCGTTATGGACAAACAGATAACACTCACCCGTATGGACGCGCCCATCATGCTTTCCGCCATTTTCATGACAACTTCTACTTTGACGAGTCTTTCTTCCACTTTCCCTTCAACAATAAGGGTGGCCGGGACTTTGCTGACAACAAATACACGTTGCATTTCAACCAGTATGTCAATGAAGTTGTGCCTGACAGCTTCAAGAGGCCTTACTTGATCAAAATCACCTCAGACTGGTGCTTCAGCTGCATCCATATCGAGCCAGTTTGGAAAGAAACAGTGCAGGAACTGGAAACGCTAGGGATTGGAATCGGTGTGGTTGATGTTGGCTATGAGCGGCGTTTAGCAAATCATTTGGGAGCACATCAGACTCCATCTATTCTTGGTGTCGTCAATGGAAAAGTGGCTTTCTTCCATTACGCTGTTGTTAAAGGCCACCTGATGCAGTTTGTAGAAGATTTGCTGCCACAGAGACTAGTTGAAAAGGTCACAGACAAAAACAACCAAGAGTTTCTGAAGAGCTGGCATGAGCTGAACAAGCCCCATGTTCTCCTGTTTGACCAAGTGCCTTCGGTTCCCTTGCTTTATAAGcTTACAGCGTTTGCCTATAAGGACTATGTGCAGTTTGGATATGTGGATCAAGGTCTTTCTGAGACCGCTGACCTGCTGAGAAAATTCAACATAAACACTTATGCGCCAACCATGCTTGTCTTCAAAGAGGATGTTGAGAAGCCTGCAGATATTATACAGGCTAAAGGGATGAAGAAGCAGATAATAGACGAGTTCATCTCCAACAACAAGTTCCTCCTGGCCCCTCGTCTGGTGAACCAGAAGCTATTTGATGAGCTTTGTCCAGTCAAACAGTTCCATCGTCGCAGGAAATATTGCGTTCTACTCATCACTGGTGAGGAAGAGTCCTTTGCCACAGGAAATGAAGCCTTCCTCTCGCTAGCCTCTGCAAACACCAATGATGTGCTGCGGTTTGCTTATGTCTACCAGCGACGTCAGCAGCCCCTATGTGATGCTCTCTTGAAAAACAAAGACAGCACACCACCACAGGTGGTGATTCTGGAAAGGCGTAACGGAGCTGGCAAGATTCTGTATAAGCCAATTTTGGGAGGATGGAACGGCAGTAAGGAAGACAAACAAAAGCTCTTGGAGGAACTCGAAAGACTGCAGAAGGATCCCTCCATCCTCAACAATGATGCCGTTCTCCCAGAGCTCAACAATGAGTTCACCTCCATGTTTTTAATAAGATGGATTTACACGGCATATGACTACTTGTCTGAAATTATTGATGATCTTCTTCACAATAACTGGCGTGAGATGATGCCCCTCCTGTCTTTGATATTCtctgcactttttattttatttggcacTGTGGTTATTCAGGCTTTCAGTGACTCAAGTGAGGAAAAACAGCCCAAAACGAAAGCAAAAGAGGTTTCCAAGGCCGAGAACGGTTCCCCAAACACCTCCAGCGCATCCAGcagtcGTCCACCAAAGAAAAACTTTGTGGAGGTGACAGAGTTAACCGACATTACATACACTAGTAACCTGGTTAAGTTGAGGCCGGGTCACATTAATGTAGTTCTGGTACTTACTGATTCTACAAAAAACATCCTGCTCAGCAAATTTGCCAAGGAAGTTTATTCGTTCACAGGGAGTTTGACCCTACACTTCTCCTTCCTAAATGTGGATAAACACAGCGAATGGATGTCGGCCGTTTTGGAATACGCCCAGGACGCCATGCAAATAGACACAGATGAGGACGAAGTGGGCAGCCGCAAATTAGACTACACAGGCTATGTTCTAGCCCTCAATGGCCATAAGAAATACCTCTGTCTTTTCAAGCCAGTCTACACAGGTGAAGACTTGGATAGCAAGCCGGAGGAGGAAGGAGGAGTTTCACGCTCCAGGAAGGGCATGACACGCTCTCGATCCACAACTCTTCAGATCCACCACAAACTGGATCGACTCGGACTCTGGATGGAGCGACTGATGGAAGGGACTCTGCCCCGGTACTACGTCCCAGCCTGGCCCGGTCTGGACAAGATCACAGTCAACAAATAAAGCCTCGTTGAAGCTAGCATGCTTTTGCTAGAGCTGATAACCCAGCTGAATTAGAAGCACCCGATGGCCTCAGCGAAACCGGGCTTGAAGCTGCTCAGAGCTGGATGCTTGTGAGACTATTCTACGTGAGTGGCTTTAGTTTAGCATTGTTGAGGAAACGAAAATGTACTTGAATCGACACTGTTGCTGACCTCGTGCAGATCTTTAATTTAGCTGCTCTAACGGAGGGCTTGGATATATCAAAAGGCTGTTGGTGGAGAGCCAAAATATCAACAGCCTAGCCTAGCTTTTGATTTTAAACACTTCCGTTACACAAATAACACTGCAACATGCTGCTAGCTGGAAAAACAGCTAACATAATGTAGCATAACATAACTATCACTGTAGACTTTTTAGTCCTAACTATGTTTACTCATGACAATGCTGTGAATTTTTACGTTTGACAATTTTAAGAGAcactttcctttttaatttaacgCCCTTAATCTACAAAGTGCAATATTTCGCTTTTTGCTAACAATTGACAATAAGGTTCTATATGTTAACTTCAGTTAATGCAGcgaatttaatgaaataacaatGCAC

Function

GO: NA

KEGG:

id description
K09536 DNAJC16; DnaJ homolog subfamily C member 16

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU261990 lncRNA downstream 214 50377 ~ 51117 (+) False G176653
TU261989 lncRNA downstream 368 50531 ~ 51481 (+) True G176653
TU261991 lncRNA downstream 368 50531 ~ 51117 (+) False G176653
TU261988 lncRNA downstream 6199 56362 ~ 58548 (+) True G176652
XM_043230375.1 mRNA upstream 3477 35761 ~ 40226 (+) True LOC122332907
XM_043230374.1 mRNA upstream 7964 33397 ~ 35739 (+) True LOC122332906
XM_043230371.1 mRNA upstream 10840 30868 ~ 32863 (+) True LOC122332904

Expression Profile