RNA id: TU264693


Basic Information

Item Value
RNA id TU264693
length 4105
RNA type TUCP
GC content 0.42
exon number 8
gene id cunh11orf98
representative True

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 100804 ~ 214275 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attttataatctttttaaaactaattatgcCCTCTCTGAACTCgcggacttttattttgcacaattcTCTAGCGCTGGTTTCCGGTATCTCAGACACAGCAGCATGGGACCAGGAGGGAAAATAAACAGACCCAGAACAGACTTGGCCAAGAAGATGTCGAAGAGAGGCAGGGTTCTGAGTCGAGATAAGAGAAGAAAGAAGCGGATCGTAGGAGCCGTGATCGACCGGGAcatcatcaccaaacaccacctgaagaagaggagCTCCAACCCCAGAGCCAACATCACGCTGTCggggaagaagaggaggaagctGATCAAGCAGCTGGCTCACATGGAGCGAGAGAAGATCTCCGCTGAAGACACGCAGAAGAAGAGCCCCGCTCCTCTCCCAGAGAACAAACCCAAGAAACCCAGAAGAGCAGCGGCAGAGAAGCACACAGAAACCATGGATGTGGATTAGAGCCGGAACACactcgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgttgaagaaaagaataaataaacttcgTAAGAGATGCATTTAGAGTCATTTAATGGATCTCACAACATCCGCGTacggtttctacaaaaatactCTTCcgcaaaactgttttcaatatcgataataatcagaatttttttctgagcatcaaatgaagatatttgtacatttactaCAAAAATAGTGATATTCATTGCtgaggacttcatttggacaactttaaaggaacTTTTCCTCCGTATTTTGACATATTGTTCGAttctaacaaaccagacatcaatggaaagatgaTTTGATCAGTTTtgaggtccagggtcacatattagaatgatttctgaaggattatgtgacactgaatactaTAGCAAAGTTATTCCTTATTATTTGATTCATGAATATACGGCTGCGTCGCTCCTCTGGAAAATCACTGAACACTAGGGGTGTGAAAACTTGAGAAAACTTTGTGTCttttaattataaacatttaatcaataCAGTGAACTAATCTAGGACTGTAACTAGGATTCTTTGGGTGAATCTGTTTTAGTAAAACAGGCCTAACTTGGTAACTTTGGTGTGATTAATAAGGAAGTAATGATTTGTCTCGCCGTTATAGTGCATTATGTATTATAACAAAAACCTGCGGCATGGAGACGCTTCACTTTACAGCGCCATCATTTAAttccatatatattttaatatctggCCTCATGCACGCTCAGAAACGTTTGAAATCGATGTATAATACATGGGATATATTAAAAGGAGGTTTATGTATTCTGTGTCGGCAAACGTTTATAAAAGGATTTCCGTTTCAAATATAGTGAGTTTTCTGATCCACGTTCAGAAAGTTGAATCCATGgcgcatgcttttttttttttttttAAATGCTGCAGAGACACCCGAGAGCCGGCGCGGAAAACTTCAAGCCCTGATGAATTATTAAGAAGAGTTCTTGAACTTGAAAAGTTCactcagttttattaaaaaaagatcatttcatTTGTTACAACAGCTTATAGACGCAACTGAATGAGCTGTACACATCCATTTTTATACAATGTTTTACATGTAAAGCATCAATAAACTAAAACTTGAGTTAGTGGAACTTTCATGACTGATGAGAAACCAAATGTTGGTCACCTTTGAACACATCCTTGCAAAGCACCATGGGAATCAAAACAAAACCGCACATAATGACCAAAACAAACCCATCATGAAAACGAAACATTTAAAGCGATTCTGTAGTGAATTAATCCGGCTCACTCTTTCAAAGTGCTTAAGACATTTTCCCCGCTGGACCCGTGACCCCTTACACaccaggtcagaggtcagaggtcaaactgAGCCGACAAACACTCAACTGATGAGTCTTACTGCCGGTGACCATCGGCTGCTTCCTGTACACtgaccctcacacacacacacacacacacacaatcactcacacacactctctctcacacacactctctctcacacacacacacacacacacacactgaatccATCCTGTAAAGTGCAGTTAAGAAAACGGAAACGCTGGTGTGAGCAGAATCATAAAGCAACTAAAAACATGGCGTTACCCAGAAGCCCTTGCAGATCAGGCCATTAAAGGTTTGGGATGCGGAGAGATTTGGAAAAGCTGATTGTACCGAAGCTGCTGACGAGAACAAGAACGATCTGAAGGCAGTGTGTGACACAAACCAACACAACCTCACCGGCCCAATGAGAGCAGCACACGACTGACGCATCCTGGTGCATGCTGGGTAATACAGGACGTTTGTGCTGGTGAGTTTCCCTTTATAAAAGCTCAAGAAGAAGTGctacaaaacacagaaacagatgCATTATGGGAAACTAAACTGCTGGAGAAACTAGAGGAACTTCAAGAGTCCCTACGtgcacatgcgcacacacacacacacacacacacacacacacacacacacagattgtctcaggtcacacacacacacacacacacacaggcgggGCGTAACAGGACAACAGCAGCACTGCAAggacatgatgatgatgaagatgatgatgatgaagatgaagattcTTCTTTATAGCTTATAAATACAGTATCTACACAGTATATGGTACAAAAATAATTGACCTTTTGTGGGCactgagattttaaaaaaaagtgaaaaatggtTCCAAGCGTCTTGTAAAAAAAAGGGTCAGGCACGAGAAGTGGTTGGTGATTGTGAGCCGTGCGGCGGGAAGCTTTCGCTCGACCGCTTCGGATCGCGTCACTTCCCGCCCGTTTCCTAAAGCGCCGTGGAGTTCGTCACGCAGAGGAGCGTACATCCGTGACGTCTCCAATAGAAAAATAGTAGAAAAATAGGAGTAGCATCTTGTTTGGCGGCTCATTGAGTGTCACAGTGTGCTGCTGCTCCGAGCCTGCAGGGGGCGACGGGCGTCTCCATCTATTTGGCATGAACGCGTTTGATTCTACACTCCTGGATTAAGGCAACATATCACGTCTGTGTGGATTTAATAaagttttctctttaaaaaaaaaaaaaaaaaaaaaaaaatgtttttacaaatttctTTTAATACAAAGCTCTATGGCATAACCAATAAACACtgtatagaaaatatataaatatgttttctttttcttttaaatgtacagaGAGCCGCCAGACCCAGTCAGAATCATTGTGCCGTCGGATATGTACACGGAGGCCATGGGAGGGGCTTATGCAGCGGTGGGCGGGGCTCACACAgcaaaaaattgttttcttgGTATGTCTGTCTTGTTTTATAgtataaacatctaaaaactCTTTTACAAGTAAATTGGTTTAAGATTTTCAGACTTGTTTCctgaaaaaaagatcaaaatgtataggtttaaaatattaagttacgTAAATGCACCTtgctttaagatattttagatgattATACGAGAAAAccaaggaattttttttttttttttttttttttTAGGACTGAACAGCattggtttatttataaatcatttacaaagtAACAAATCAGCTCATCTGACAGGACACACGCCTGCTTCAAATGATACATTGTATTTCAACAACAATGCGATTTCCATAGCAACCCCTGTCCTGACAGACAGTATCCGTCCGCTCAGTCACATTAATAACGTTCAGTGTTCAAGTACAGAGCTCAGCCAGCAGCAGTAGTCATTAGTGATCCACACAGAGCTACAGAACACCAGGAAAACATCCGCATAAAAGACAGAACTGTCAGTACAACAGATATAAAATCATGCAAACTGACAAAGTAAAGtagagagattgtgtgtgtgagtgcatcaCGCTCGTGACAGCAGCTCCTGCGCTCGGCTCTTGGCGGCAGACGTGGCGTCCTGCAGGTACATCCAGGTGCTGTTGGTGAAGGATCTCAGGTGCTTCTGTAAGCAGTGCAGAGACAcctctccCTTGCAGGACTCTTGTAGGTTCCTCCAGATGCTCTGTAGAGCAGCGGTCAGATACTGCAGCGCCGGGACGAGGACGTGCTCCTGGACATACAGCAGCAGCTGCTTCACACACTCCAGAAGATCAAACACACTCTCAGGAGTGTTCGCCTggacctga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264738 lncRNA upstream 43023 72426 ~ 73222 (+) True G178455
TU264732 lncRNA upstream 44767 24063 ~ 71478 (+) True G178449
TU264707 lncRNA downstream 401 214676 ~ 216450 (+) True G178430
TU264714 lncRNA downstream 9081 223356 ~ 312046 (+) False G178434
TU264715 lncRNA downstream 9081 223356 ~ 235911 (+) True G178434
TU264808 lncRNA downstream 24802 239077 ~ 239863 (+) True G178498
TU264719 lncRNA downstream 25642 239917 ~ 240392 (+) True G178437
XM_043230765.1 mRNA upstream 22364 82433 ~ 93881 (+) True phtf2
XM_043230811.1 mRNA downstream 95923 310198 ~ 311201 (+) True ripply2
XM_043230715.1 mRNA downstream 137804 352079 ~ 389366 (+) True LOC122333200
XM_043230712.1 mRNA downstream 176677 390952 ~ 396784 (+) False naga
XM_043230714.1 mRNA downstream 176684 390959 ~ 396784 (+) True naga
XM_043230690.1 mRNA downstream 218698 432973 ~ 448981 (+) True rerg
TU264814 other downstream 50242 264517 ~ 266728 (+) True G178503
TU264861 other downstream 236851 451126 ~ 456354 (+) True G178541
TU264903 other downstream 310036 524311 ~ 538878 (+) True LOC122333210
TU264989 other downstream 561137 775412 ~ 778365 (+) True crebl2
TU264990 other downstream 561137 775412 ~ 778365 (+) False crebl2

Expression Profile