RNA id: XM_043230688.1


Basic Information

Item Value
RNA id XM_043230688.1
length 1233
RNA type mRNA
GC content 0.41
exon number 4
gene id cunh11orf98
representative False

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 100804 ~ 214275 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttgcacaattcTCTAGCGCTGGTTTCCGGTATCTCAGACACAGCAGCATGGGACCAGGAGGGAAAATAAACAGACCCAGAACAGACTTGGCCAAGAAGATGTCGAAGAGAGGCAGGGTTCTGAGTCGAGATAAGAGAAGAAAGAAGCGGATCGTAGGAGCCGTGATCGACCGGGAcatcatcaccaaacaccacctgaagaagaggagCTCCAACCCCAGAGCCAACATCACGCTGTCggggaagaagaggaggaagctGATCAAGCAGCTGGCTCACATGGAGCGAGAGAAGATCTCCGCTGAAGCAGACACGCAGAAGAAGAGCCCCGCTCCTCTCCCAGAGAACAAACCCAAGAAACCCAGAAGAGCAGCGGCAGAGAAGCACACAGAAACCATGGATGTGGATTAGAGCCGGAACACactcgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgttgaagaaaagaataaataaacttcgTAAGAGATGCATTTAGAGTCATTTAATGGATCTCACAACATCCGCGTacggtttctacaaaaatactCTTCcgcaaaactgttttcaatatcgataataatcagaatttttttctgagcatcaaatgaagatatttgtacatttactaCAAAAATAGTGATATTCATTGCtgaggacttcatttggacaactttaaaggaacTTTTCCTCCGTATTTTGACATATTGTTCGAttctaacaaaccagacatcaatggaaagatgaTTTGATCAGTTTtgaggtccagggtcacatattagaatgatttctgaaggattatgtgacactgaatactaTAGCAAAGTTATTCCTTATTATTTGATTCATGAATATACGGCTGCGTCGCTCCTCTGGAAAATCACTGAACACTAGGGGTGTGAAAACTTGAGAAAACTTTGTGTCttttaattataaacatttaatcaataCAGTGAACTAATCTAGGACTGTAACTAGGATTCTTTGGGTGAATCTGTTTTAGTAAAACAGGCCTAACTTGGTAACTTTGGTGTGATTAATAAGGAAGTAATGATTTGTCTCGCCGTTATAGTGCATTATGTATTATAACAAAAACCTGCGGCATGGAGACGCTTCACTTTACAGCGCCATCATTTAAttccatatatattttaatatctggCCTCATGCACGCTCAGAAACGTTTGAAATCGATGTATAATACATGGGATATATTAAAAGGAGGTTTATGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264738 lncRNA upstream 43078 72426 ~ 73222 (+) True G178455
TU264732 lncRNA upstream 44822 24063 ~ 71478 (+) True G178449
TU264758 lncRNA downstream 7050 124958 ~ 132288 (+) True G178469
TU264731 lncRNA downstream 16145 134053 ~ 180549 (+) True G178448
TU264717 lncRNA downstream 76791 194699 ~ 233283 (+) True G178435
TU264802 lncRNA downstream 88162 206070 ~ 207393 (+) True G178492
TU264791 lncRNA downstream 90433 208341 ~ 209171 (+) False G178488
XM_043230765.1 mRNA upstream 22419 82433 ~ 93881 (+) True phtf2
XM_043230809.1 mRNA downstream 32543 150451 ~ 152682 (+) False dynlt1b
XM_043230697.1 mRNA downstream 59555 177463 ~ 179382 (+) True mrps10
XM_043230755.1 mRNA downstream 79906 197814 ~ 198114 (+) True ost4
XM_043230811.1 mRNA downstream 192290 310198 ~ 311201 (+) True ripply2
XM_043230715.1 mRNA downstream 234171 352079 ~ 389366 (+) True LOC122333200
TU264696 other downstream 32613 150521 ~ 153215 (+) True dynlt1b
TU264814 other downstream 146609 264517 ~ 266728 (+) True G178503
TU264861 other downstream 333218 451126 ~ 456354 (+) True G178541
TU264903 other downstream 406403 524311 ~ 538878 (+) True LOC122333210
TU264989 other downstream 657504 775412 ~ 778365 (+) True crebl2

Expression Profile