RNA id: TU264696


Basic Information

Item Value
RNA id TU264696
length 2120
RNA type TUCP
GC content 0.41
exon number 4
gene id dynlt1b
representative True

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 150451 ~ 153215 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGCCGAGGCTTCGACCAACAACAGCGAGACATGGACGACGACCAGAGCGCGGAAGAGACGACGTTTGTGGTGGATGAAGTGAGCGGCATCGTGAAGGAGtctCTGGAAGCAGTGATCGGCAGGAACCCGTATGACCACAAGCGTGTGAACCAGTGGATGTCCAGCGTGGTGGAGCAGTGCCTGGGTCAGCTCAGCAAACTCAGCAAACCCTTCAAGTACATCGTCACATGTATCATAATGCAGAAAAATGGTGCAGGACTGCAGTCGGCTTCTTCGTGTTTCTGGGACAATAACACAGACGGTAAGAGCCAGAGTTCTGTTCAAATAGAAATGTGCTCAGCggttccacacacacacacacacacacacacacctttgacCCAtcttacaaaaattatattctgaGAATGTTTTGCTGACATTcctgttaaaaatattactcCTGAGGTTCTGTGATCATTTAAACGTCCAGGATTTTTGTcgttttaaacagtttttcttgGTTATGCAAACTTTAAGGAAAGAttccatttaaacatttatcaaatattatgGGAATGTTATGTGAAGTGTTCTTTTAACGTCCTGAAACGAGCGTCGGCATTTTAATAACGTCATGTTTTGAGAAGATCAACAAAAGCTTTGCATGAAAGTTATAGGAAAGGCAGGATTTTGACAGATAAGCCAAAGTTATTAGAAGTTCAGTGTATTTTATTAACCGTACACTCATTTATATTTTGAGAGATAATTCTAAAGAAGTATTACACGTAATTCAGTCATTGATAAACATttccataaataaatgtagtttaatgttacaaaaatatcacctagtgttaaaaatgtgtctcagaccaaaaaaaaaaaagacagtattGTTTTTATCCCCGTCTCTGGAACTTACagtattatgttattaaaagtgaaacttttttttttttcctaaattcAGTATAAAGTGTGTGTCTGGAGCAGAAATAGAGCACAGTACACTAATCATCAGGATAATAAAGATCATCCAGTCAGGATATGCCGTCACGTTCCTACTGTAAAcatgaaaactttatttttgaatgaatatgtatttgtaaCCGCGTCTCGGTcagatgttgtgtgtgtggtgtgttcCTCAGGCAGCTGCACGGTGAGATGGGAAAACAAACACCTGTACTGCGTGGTCAGTGTGTTCGGCCTCGCTCTGTAGAGTCAGTGATCCTGCACAATAAACTCAATTCACCTCTTAAAAGTGTCTGAAGAGTTTATTCCACATTCGCTCAGACGTCACGACAGTGCAGGTGAAGCTCGGCGCTTCGGGAATGATCTTATGTACACGTGGAAAGGCACAGCGAACCTCTCAATGAAACCACGTCTTCAGAAGACATCGGAGtgaaccaaacaaaaaaaaacaaggcgcTCGGGTCCTCAGCGGGACCCTGGAAGTGATTCAGACCCACAAAACAATGATCAGAAGTAGAGGAAAACAGGAGAGAAACGAGTAGAGGCACAATAAAACAGGAATGTGAGAAAACAAGGCTGAAGTACAAGATCCAGTGAAGGCTCCAGAGACGCTCCAAACAGAACCAAACCAATAGAGTTATATGCAGCTTCCTCACACGTTCTGAATAGAGTCTGATGGATGAGGCCAATCACATAAACACAACATCTCTCGCTCAAGAACCAAAGGAATAAAAGATTTAGAGACCCTTAATGGGGGGTTTTCATGAAAATTAAGCACATTTACCCTAAATTATTactgcattgcaaaaaaacaacaaaaaaaaaagcagcatttcgtatgaaaatatttataaaataattctttttagatgtttatacTTGCTTCGTCAAGGTACTATGTGTTAAACCGATTTATTATCACAGGGTtgaaatgtgcttaattatctcgaatgcaaaagaaaatatacaCGATTGATTTCTCCTCTTTAGAGTCCCCAGCCGAGGTCAGGAACGGAGTTAAAAACACCTCTATATTTACACACGGTTCATCTGTATACATGATCCGGAGTCACTCCGCTTTCAGTCGCTCTCGCTCTCATCCTGGTATTTGGCGCTGGCTTTGATGGCACGGCCATTCTGAAGAGGCATTTCCTCGTAGTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264758 lncRNA upstream 18233 124958 ~ 132288 (+) True G178469
TU264688 lncRNA upstream 29910 100804 ~ 120611 (+) False cunh11orf98
TU264738 lncRNA upstream 77299 72426 ~ 73222 (+) True G178455
TU264732 lncRNA upstream 79043 24063 ~ 71478 (+) True G178449
TU264717 lncRNA downstream 41484 194699 ~ 233283 (+) True G178435
TU264802 lncRNA downstream 52855 206070 ~ 207393 (+) True G178492
TU264791 lncRNA downstream 55126 208341 ~ 209171 (+) False G178488
TU264792 lncRNA downstream 55126 208341 ~ 209171 (+) True G178488
TU264793 lncRNA downstream 55126 208341 ~ 209007 (+) False G178488
XM_043230688.1 mRNA upstream 32613 116300 ~ 117908 (+) False cunh11orf98
XM_043230689.1 mRNA upstream 32613 116300 ~ 117908 (+) False cunh11orf98
XM_043230765.1 mRNA upstream 56640 82433 ~ 93881 (+) True phtf2
XM_043230697.1 mRNA downstream 24248 177463 ~ 179382 (+) True mrps10
XM_043230755.1 mRNA downstream 44599 197814 ~ 198114 (+) True ost4
XM_043230811.1 mRNA downstream 156983 310198 ~ 311201 (+) True ripply2
XM_043230715.1 mRNA downstream 198864 352079 ~ 389366 (+) True LOC122333200
XM_043230712.1 mRNA downstream 237737 390952 ~ 396784 (+) False naga
TU264685 other upstream 29910 116245 ~ 120611 (+) False cunh11orf98
TU264814 other downstream 111302 264517 ~ 266728 (+) True G178503
TU264861 other downstream 297911 451126 ~ 456354 (+) True G178541
TU264903 other downstream 371096 524311 ~ 538878 (+) True LOC122333210
TU264989 other downstream 622197 775412 ~ 778365 (+) True crebl2
TU264990 other downstream 622197 775412 ~ 778365 (+) False crebl2

Expression Profile