RNA id: TU264719


Basic Information

Item Value
RNA id TU264719
length 308
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G178437
representative True

Chromosome Information

Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 239917 ~ 240392 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgagaccttGGTGCCGCTGTAGAAGTCGTCCTGTGTGTTTGCGTTCATGAAGGTCTGATGTAGATGAACGCTGGAGTCGATGCCTCCTGGAATCACCAGCTTCCCGGAAGCGTCAATCACTTTGGCTCCGCCTGGAATCATCAGGTCCCGCCCCACCTGCACGATGAGCCCGTTCTCAATGTAAACATCCGCCTCCTGAGTGACATCATCGTTCACGACCCGCCCACCTTTGATGAGAATCCTCATGGAGCTCGAACCCGCAGCCATTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264808 lncRNA upstream 54 239077 ~ 239863 (+) True G178498
TU264715 lncRNA upstream 4006 223356 ~ 235911 (+) True G178434
TU264707 lncRNA upstream 23467 214676 ~ 216450 (+) True G178430
TU264686 lncRNA upstream 25642 213192 ~ 214275 (+) False cunh11orf98
TU264792 lncRNA upstream 30746 208341 ~ 209171 (+) True G178488
TU264809 lncRNA downstream 3025 243417 ~ 244921 (+) True G178499
TU264733 lncRNA downstream 4700 245092 ~ 245818 (+) True G178450
TU264812 lncRNA downstream 9926 250318 ~ 252182 (+) True G178501
TU264857 lncRNA downstream 166119 406511 ~ 409812 (+) True G178537
TU264873 lncRNA downstream 189621 430013 ~ 432336 (+) True G178549
XM_043230755.1 mRNA upstream 41803 197814 ~ 198114 (+) True ost4
XM_043230697.1 mRNA upstream 60535 177463 ~ 179382 (+) True mrps10
XM_043230809.1 mRNA upstream 87235 150451 ~ 152682 (+) False dynlt1b
XM_043230688.1 mRNA upstream 122009 116300 ~ 117908 (+) False cunh11orf98
XM_043230811.1 mRNA downstream 69806 310198 ~ 311201 (+) True ripply2
XM_043230715.1 mRNA downstream 111687 352079 ~ 389366 (+) True LOC122333200
XM_043230712.1 mRNA downstream 150560 390952 ~ 396784 (+) False naga
XM_043230714.1 mRNA downstream 150567 390959 ~ 396784 (+) True naga
XM_043230690.1 mRNA downstream 192581 432973 ~ 448981 (+) True rerg
TU264693 other upstream 25642 116245 ~ 214275 (+) True cunh11orf98
TU264696 other upstream 86702 150521 ~ 153215 (+) True dynlt1b
TU264685 other upstream 119306 116245 ~ 120611 (+) False cunh11orf98
TU264814 other downstream 24125 264517 ~ 266728 (+) True G178503
TU264861 other downstream 210734 451126 ~ 456354 (+) True G178541
TU264903 other downstream 283919 524311 ~ 538878 (+) True LOC122333210
TU264989 other downstream 535020 775412 ~ 778365 (+) True crebl2
TU264990 other downstream 535020 775412 ~ 778365 (+) False crebl2

Expression Profile