RNA id: TU264791



Basic Information


Item Value
RNA id TU264791
length 615
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G178488
representative False

Chromosome Information


Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 208341 ~ 209171 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTCAAACGCTTTCCTCAGAAACGAACTTTCTTTGGTGCTGAAGAAAGACGTGAAGATCAGAGAGTGTTTCTTCTGGAGACGTTCTTCTCAGCACCTCGAAGACGGGTCTGTCCCGCACTCTCTCCCAGCGAGTCTTGACGGGCAGCGAGCGGACGAACGGAGCCATGCCCTGCGAGTACAGCTTGCTCTGCTTGTTCATGTTCATCATGTTGATCTTCAGCAGCTTGCCCGGCAACATCCCTCGAACGCTGAAGTAAAACCACGagctacagaaacacagactGAGAGACACTTCACCCCAGAATGAGACTCGTGTCACGAATCActcgtaagaccttcgttcatcttcagaacacaaatgaagatgtttctgatgaaatcggagagctCTGGGCTTTttcgcaaagaaaacaaaaataacataattcacataaataattacatcTTCTGCTGTTTTAgagagtaacacacacacacacacacacacactcacagacacacacacacacacacacacactcacacacacacacacacacacacactcacagacacacacacacacacacacactcacacacacacacacacacacacacacacacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264802 lncRNA upstream 948 206070 ~ 207393 (+) True G178492
TU264731 lncRNA upstream 27792 134053 ~ 180549 (+) True G178448
TU264758 lncRNA upstream 76053 124958 ~ 132288 (+) True G178469
TU264688 lncRNA upstream 87730 100804 ~ 120611 (+) False cunh11orf98
TU264738 lncRNA upstream 135119 72426 ~ 73222 (+) True G178455
TU264686 lncRNA downstream 4021 213192 ~ 214275 (+) False cunh11orf98
TU264707 lncRNA downstream 5505 214676 ~ 216450 (+) True G178430
TU264714 lncRNA downstream 14185 223356 ~ 312046 (+) False G178434
TU264715 lncRNA downstream 14185 223356 ~ 235911 (+) True G178434
TU264808 lncRNA downstream 29906 239077 ~ 239863 (+) True G178498
XM_043230755.1 mRNA upstream 10227 197814 ~ 198114 (+) True ost4
XM_043230697.1 mRNA upstream 28959 177463 ~ 179382 (+) True mrps10
XM_043230809.1 mRNA upstream 55659 150451 ~ 152682 (+) False dynlt1b
XM_043230688.1 mRNA upstream 90433 116300 ~ 117908 (+) False cunh11orf98
XM_043230811.1 mRNA downstream 101027 310198 ~ 311201 (+) True ripply2
XM_043230715.1 mRNA downstream 142908 352079 ~ 389366 (+) True LOC122333200
XM_043230712.1 mRNA downstream 181781 390952 ~ 396784 (+) False naga
XM_043230714.1 mRNA downstream 181788 390959 ~ 396784 (+) True naga
XM_043230690.1 mRNA downstream 223802 432973 ~ 448981 (+) True rerg
TU264696 other upstream 55126 150521 ~ 153215 (+) True dynlt1b
TU264685 other upstream 87730 116245 ~ 120611 (+) False cunh11orf98
TU264814 other downstream 55346 264517 ~ 266728 (+) True G178503
TU264861 other downstream 241955 451126 ~ 456354 (+) True G178541
TU264903 other downstream 315140 524311 ~ 538878 (+) True LOC122333210
TU264989 other downstream 566241 775412 ~ 778365 (+) True crebl2
TU264990 other downstream 566241 775412 ~ 778365 (+) False crebl2

Expression Profile