RNA id: TU264808



Basic Information


Item Value
RNA id TU264808
length 621
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G178498
representative True

Chromosome Information


Item Value
chromosome id NW_025047891.1
NCBI id JAEQBD010000236.1
chromosome length 1270053
location 239077 ~ 239863 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgagaagagcagtctcacacacacacacagcgcgtGATGCTGCAGATCCGAGTCGACGTGAGAGGAATATTAACGTGTGTGTGACCGAGACGCACAAAAGACTCTGGAGCCCTTCTTTCTGTTTGTCCTCCTGCTCTAGACTCTTCTCAGAACACCGTCATATATAGAGTTACCGTTGTCGGGGGAAAAGTATCTTGAAGTTATGTGTAGAATGTATAGAACTGTGTAATAGATTCTCGTAAGAGAGATGTGTTCAATCCCTGGCGGACCGGGCCTCGAACCCACGACCTTTGACCCTCCGTCATCTTCTCACTCTTAACCTGCTCTGCATCTCGTGGATCTTCCCGTCGCTGCTCTTTCATGTAGAGAACTGCtcttattttctatataatgacgtatttaaaaattaatgaccAAATAGATGTTTATAAAAGTTCATGTTGAAAGTTCACAAATGAAATTTAACCAGGTTGATGTTAATTATTGCTAACTCAAACCCCCTTTTTGTATACCTCTctaccactgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264715 lncRNA upstream 3166 223356 ~ 235911 (+) True G178434
TU264717 lncRNA upstream 5794 194699 ~ 233283 (+) True G178435
TU264707 lncRNA upstream 22627 214676 ~ 216450 (+) True G178430
TU264686 lncRNA upstream 24802 213192 ~ 214275 (+) False cunh11orf98
TU264791 lncRNA upstream 29906 208341 ~ 209171 (+) False G178488
TU264719 lncRNA downstream 54 239917 ~ 240392 (+) True G178437
TU264809 lncRNA downstream 3554 243417 ~ 244921 (+) True G178499
TU264733 lncRNA downstream 5229 245092 ~ 245818 (+) True G178450
TU264812 lncRNA downstream 10455 250318 ~ 252182 (+) True G178501
TU264857 lncRNA downstream 166648 406511 ~ 409812 (+) True G178537
XM_043230755.1 mRNA upstream 40963 197814 ~ 198114 (+) True ost4
XM_043230697.1 mRNA upstream 59695 177463 ~ 179382 (+) True mrps10
XM_043230809.1 mRNA upstream 86395 150451 ~ 152682 (+) False dynlt1b
XM_043230688.1 mRNA upstream 121169 116300 ~ 117908 (+) False cunh11orf98
XM_043230811.1 mRNA downstream 70335 310198 ~ 311201 (+) True ripply2
XM_043230715.1 mRNA downstream 112216 352079 ~ 389366 (+) True LOC122333200
XM_043230712.1 mRNA downstream 151089 390952 ~ 396784 (+) False naga
XM_043230714.1 mRNA downstream 151096 390959 ~ 396784 (+) True naga
XM_043230690.1 mRNA downstream 193110 432973 ~ 448981 (+) True rerg
TU264693 other upstream 24802 116245 ~ 214275 (+) True cunh11orf98
TU264696 other upstream 85862 150521 ~ 153215 (+) True dynlt1b
TU264685 other upstream 118466 116245 ~ 120611 (+) False cunh11orf98
TU264814 other downstream 24654 264517 ~ 266728 (+) True G178503
TU264861 other downstream 211263 451126 ~ 456354 (+) True G178541
TU264903 other downstream 284448 524311 ~ 538878 (+) True LOC122333210
TU264989 other downstream 535549 775412 ~ 778365 (+) True crebl2
TU264990 other downstream 535549 775412 ~ 778365 (+) False crebl2

Expression Profile